Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC005351.1-201ENST00000511152 786 ntBASIC3.68□□□□□ -1.82
LSM1O15116 RAC1P2-201ENST00000511164 579 ntBASIC3.68□□□□□ -1.82
LSM1O15116 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.68□□□□□ -1.82
LSM1O15116 RNA5SP208-201ENST00000516156 78 ntBASIC3.68□□□□□ -1.82
LSM1O15116 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.68□□□□□ -1.82
LSM1O15116 RN7SKP209-201ENST00000516888 304 ntBASIC3.68□□□□□ -1.82
LSM1O15116 AC004923.2-201ENST00000529649 369 ntBASIC3.68□□□□□ -1.82
LSM1O15116 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.68□□□□□ -1.82
LSM1O15116 AC025884.1-201ENST00000556034 378 ntBASIC3.68□□□□□ -1.82
LSM1O15116 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.68□□□□□ -1.82
LSM1O15116 MIR3939-201ENST00000582614 106 ntBASIC3.68□□□□□ -1.82
LSM1O15116 AC005242.1-201ENST00000585658 438 ntBASIC3.68□□□□□ -1.82
LSM1O15116 AL365503.1-201ENST00000605247 905 ntBASIC3.68□□□□□ -1.82
LSM1O15116 AC015802.5-201ENST00000607478 399 ntBASIC3.68□□□□□ -1.82
LSM1O15116 MIR6867-201ENST00000610636 67 ntBASIC3.68□□□□□ -1.82
LSM1O15116 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.68□□□□□ -1.82
LSM1O15116 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.68□□□□□ -1.82
LSM1O15116 AC104820.1-201ENST00000624183 307 ntBASIC3.68□□□□□ -1.82
LSM1O15116 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.68□□□□□ -1.82
LSM1O15116 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.68□□□□□ -1.82
LSM1O15116 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LSM1O15116 ZNF90P1-201ENST00000480493 1951 ntBASIC3.68□□□□□ -1.82
LSM1O15116 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LSM1O15116 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.68□□□□□ -1.82
LSM1O15116 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LSM1O15116 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LSM1O15116 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.67□□□□□ -1.82
LSM1O15116 AC118273.1-201ENST00000525324 3006 ntBASIC3.67□□□□□ -1.82
LSM1O15116 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LSM1O15116 RNU6-356P-201ENST00000384140 107 ntBASIC3.67□□□□□ -1.82
LSM1O15116 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LSM1O15116 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LSM1O15116 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LSM1O15116 VTA1P1-201ENST00000414044 866 ntBASIC3.67□□□□□ -1.82
LSM1O15116 XKRYP4-201ENST00000414395 483 ntBASIC3.67□□□□□ -1.82
LSM1O15116 LIPT1P1-201ENST00000415870 1186 ntBASIC3.67□□□□□ -1.82
LSM1O15116 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.67□□□□□ -1.82
LSM1O15116 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.67□□□□□ -1.82
LSM1O15116 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.67□□□□□ -1.82
LSM1O15116 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.67□□□□□ -1.82
LSM1O15116 SKP1P1-201ENST00000438081 489 ntBASIC3.67□□□□□ -1.82
LSM1O15116 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.67□□□□□ -1.82
LSM1O15116 RPL29P29-201ENST00000448725 423 ntBASIC3.67□□□□□ -1.82
LSM1O15116 XKRYP5-201ENST00000449659 483 ntBASIC3.67□□□□□ -1.82
LSM1O15116 AC006539.3-201ENST00000454258 129 ntBASIC3.67□□□□□ -1.82
LSM1O15116 RPS23P7-201ENST00000466210 444 ntBASIC3.67□□□□□ -1.82
LSM1O15116 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.67□□□□□ -1.82
LSM1O15116 RPS3AP6-201ENST00000484430 795 ntBASIC3.67□□□□□ -1.82
LSM1O15116 AC110792.1-201ENST00000491826 472 ntBASIC3.67□□□□□ -1.82
LSM1O15116 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.67□□□□□ -1.82
LSM1O15116 RN7SKP141-201ENST00000516167 338 ntBASIC3.67□□□□□ -1.82
LSM1O15116 RN7SKP83-201ENST00000516512 178 ntBASIC3.67□□□□□ -1.82
LSM1O15116 SOD1P3-201ENST00000518682 454 ntBASIC3.67□□□□□ -1.82
LSM1O15116 RAB9BP1-201ENST00000519581 626 ntBASIC3.67□□□□□ -1.82
LSM1O15116 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.67□□□□□ -1.82
LSM1O15116 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.67□□□□□ -1.82
LSM1O15116 AC074029.1-201ENST00000552531 1044 ntBASIC3.67□□□□□ -1.82
LSM1O15116 TRAV37-201ENST00000553906 342 ntBASIC3.67□□□□□ -1.82
LSM1O15116 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.67□□□□□ -1.82
LSM1O15116 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.67□□□□□ -1.82
LSM1O15116 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.67□□□□□ -1.82
LSM1O15116 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LSM1O15116 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.67□□□□□ -1.82
LSM1O15116 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.67□□□□□ -1.82
LSM1O15116 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.67□□□□□ -1.82
LSM1O15116 BX322635.1-201ENST00000605804 496 ntBASIC3.67□□□□□ -1.82
LSM1O15116 AC018754.1-201ENST00000607486 925 ntBASIC3.67□□□□□ -1.82
LSM1O15116 AL355802.4-201ENST00000607635 548 ntBASIC3.67□□□□□ -1.82
LSM1O15116 AC112503.1-201ENST00000608436 391 ntBASIC3.67□□□□□ -1.82
LSM1O15116 AC005962.2-201ENST00000611427 652 ntBASIC3.67□□□□□ -1.82
LSM1O15116 AL359535.1-201ENST00000612100 1087 ntBASIC3.67□□□□□ -1.82
LSM1O15116 AC079684.1-201ENST00000621405 437 ntBASIC3.67□□□□□ -1.82
LSM1O15116 AC048347.1-201ENST00000624621 427 ntBASIC3.67□□□□□ -1.82
LSM1O15116 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.67□□□□□ -1.82
LSM1O15116 MIR492-201ENST00000638676 116 ntBASIC3.67□□□□□ -1.82
LSM1O15116 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.67□□□□□ -1.82
LSM1O15116 AL672296.1-201ENST00000427780 2158 ntBASIC3.67□□□□□ -1.82
LSM1O15116 CR381670.1-201ENST00000624291 1693 ntBASIC3.67□□□□□ -1.82
LSM1O15116 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.67□□□□□ -1.82
LSM1O15116 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.67□□□□□ -1.82
LSM1O15116 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LSM1O15116 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
LSM1O15116 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LSM1O15116 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LSM1O15116 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LSM1O15116 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LSM1O15116 SNORD51.1-201ENST00000365405 77 ntBASIC3.66□□□□□ -1.82
LSM1O15116 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LSM1O15116 SNORA48.8-201ENST00000391324 134 ntBASIC3.66□□□□□ -1.82
LSM1O15116 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.66□□□□□ -1.82
LSM1O15116 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LSM1O15116 ZNF965P-201ENST00000432501 817 ntBASIC3.66□□□□□ -1.82
LSM1O15116 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.66□□□□□ -1.82
LSM1O15116 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.66□□□□□ -1.82
LSM1O15116 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.66□□□□□ -1.82
LSM1O15116 SNORA71B-202ENST00000439232 272 ntBASIC3.66□□□□□ -1.82
LSM1O15116 HMGB1P48-201ENST00000446155 598 ntBASIC3.66□□□□□ -1.82
LSM1O15116 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.66□□□□□ -1.82
LSM1O15116 AC108941.1-201ENST00000502853 530 ntBASIC3.66□□□□□ -1.82
LSM1O15116 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 258.6 ms