Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 RNA5SP50-201ENST00000363731 107 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 SNORD6-201ENST00000365444 73 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 SNORD3H-201ENST00000384486 214 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL391417.1-201ENST00000404100 426 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 MTATP6P11-201ENST00000428071 670 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 RPL21P23-201ENST00000446654 460 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC073387.1-201ENST00000453261 709 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 PLGLA-201ENST00000465668 449 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 LARP7P4-201ENST00000481075 878 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC026427.2-201ENST00000506228 536 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 GTF2IP22-201ENST00000554443 182 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL109741.3-201ENST00000561748 592 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC005412.1-201ENST00000580812 1049 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 FAM106CP-201ENST00000582212 507 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 MIR5195-201ENST00000583555 115 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 BNIP3P19-201ENST00000605397 577 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 RNU1-30P-201ENST00000606575 163 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC00216-201ENST00000623548 1126 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC020923.1-201ENST00000624021 917 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC091905.1-201ENST00000624400 311 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL163152.1-201ENST00000642001 374 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL139811.1-201ENST00000424779 2299 ntBASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.6□□□□□ -1.83
TMX2-CTNND1H3BSU7 MTCO1P14-201ENST00000441695 1559 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 RNA5SP51-201ENST00000364750 119 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 OR13C3-201ENST00000374781 1108 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC068533.1-201ENST00000418542 415 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL035551.1-201ENST00000446931 348 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 HMGB3P8-201ENST00000449709 577 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 PCNAP1-201ENST00000505363 709 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 RNU6-319P-201ENST00000516025 108 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 RN7SKP83-201ENST00000516512 178 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL121766.1-201ENST00000547436 487 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 ZNF415P1-201ENST00000582279 1166 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC123786.2-201ENST00000603459 275 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL355802.4-201ENST00000607635 548 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 RMST_5.1-201ENST00000618704 126 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC092628.2-201ENST00000622492 339 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 PRO1804-201ENST00000623780 2050 ntBASIC3.59□□□□□ -1.83
TMX2-CTNND1H3BSU7 RIOK3P1-201ENST00000418778 1528 ntBASIC3.59□□□□□ -1.84
TMX2-CTNND1H3BSU7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TMX2-CTNND1H3BSU7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 RNU6-40P-201ENST00000384254 107 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 RNA5SP424-201ENST00000390988 115 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 CCNB2P1-201ENST00000399411 1150 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL589655.1-201ENST00000405398 482 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms