Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AP001052.1-201ENST00000626421 99 ntBASIC6.91□□□□□ -1.3
LHX6Q9UPM6 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LHX6Q9UPM6 AC008498.2-201ENST00000624033 2322 ntBASIC6.91□□□□□ -1.3
LHX6Q9UPM6 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
LHX6Q9UPM6 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LHX6Q9UPM6 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
LHX6Q9UPM6 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.91□□□□□ -1.3
LHX6Q9UPM6 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.91□□□□□ -1.3
LHX6Q9UPM6 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LHX6Q9UPM6 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LHX6Q9UPM6 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LHX6Q9UPM6 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 CTAGE3P-201ENST00000454280 2404 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 NF1P2-201ENST00000556855 2505 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 Y_RNA.127-201ENST00000363386 109 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 RNU6-595P-201ENST00000363944 107 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 RNU6-449P-201ENST00000383914 107 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 RNU6-45P-201ENST00000384471 107 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 RNU6-257P-201ENST00000410238 98 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 GSTA10P-201ENST00000412182 576 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 EI24P4-201ENST00000423683 1078 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 PRUNEP1-201ENST00000425846 705 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 AL591043.1-201ENST00000432461 424 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 AC110602.1-201ENST00000437414 318 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 RPS26P56-201ENST00000444468 240 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 AC234771.2-201ENST00000445718 597 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 AC016925.1-201ENST00000458303 298 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 AC097462.2-201ENST00000504623 481 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 AC006427.1-201ENST00000514359 712 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 Y_RNA.679-201ENST00000516416 91 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 AC090151.1-201ENST00000520784 730 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.9□□□□□ -1.3
LHX6Q9UPM6 HSP90AA4P-202ENST00000506915 2228 ntBASIC6.9□□□□□ -1.3
LHX6Q9UPM6 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
LHX6Q9UPM6 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
LHX6Q9UPM6 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
LHX6Q9UPM6 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
LHX6Q9UPM6 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
LHX6Q9UPM6 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
LHX6Q9UPM6 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.9□□□□□ -1.31
LHX6Q9UPM6 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.9□□□□□ -1.31
LHX6Q9UPM6 AP000766.1-201ENST00000561746 4140 ntBASIC6.9□□□□□ -1.31
LHX6Q9UPM6 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.9□□□□□ -1.31
LHX6Q9UPM6 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
LHX6Q9UPM6 HSPA8P11-201ENST00000508840 1898 ntBASIC6.9□□□□□ -1.31
LHX6Q9UPM6 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
LHX6Q9UPM6 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 AC107021.2-201ENST00000567714 2095 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 MAPK10-319ENST00000641459 2542 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 Y_RNA.215-201ENST00000364204 112 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 SNORD73A-201ENST00000386062 65 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 Y_RNA.590-201ENST00000410140 107 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 AC006946.1-201ENST00000429106 328 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 AL353754.1-201ENST00000440219 340 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 AL445433.1-201ENST00000457507 257 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 Y_RNA.638-201ENST00000459374 113 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 RPL37P6-202ENST00000464216 403 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 RPS27P20-201ENST00000492051 246 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 AC005726.1-201ENST00000494679 427 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 AC108043.1-201ENST00000512696 574 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 ERHP1-201ENST00000523006 310 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms