Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 RAB9AP3-201ENST00000412737 573 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 MTND2P15-201ENST00000418575 892 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 AL691447.1-201ENST00000419456 387 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 AL606490.7-201ENST00000433136 191 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 USP9YP7-201ENST00000436723 430 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 NOTCH2P1-201ENST00000443481 624 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 RAB9AP1-201ENST00000449393 573 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 USP9YP32-201ENST00000452432 430 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 AL133162.1-201ENST00000463228 453 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 ACTR3P3-201ENST00000480448 893 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 AC010285.3-201ENST00000511668 676 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 Vault.1-201ENST00000516474 102 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 RNU6-1231P-201ENST00000517185 103 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 PTP4A1P6-201ENST00000531034 478 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 AL121766.1-201ENST00000547436 487 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 SRGNP1-201ENST00000603392 451 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 AL163642.2-201ENST00000604722 1019 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 AL049634.3-201ENST00000604968 457 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 AC007179.3-201ENST00000604976 235 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 AC012314.7-201ENST00000619693 93 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 AC091953.5-201ENST00000622919 233 ntBASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNNA3Q9UI47 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CTNNA3Q9UI47 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CTNNA3Q9UI47 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CTNNA3Q9UI47 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 AC004022.2-201ENST00000413824 193 ntBASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 PRELID3BP11-201ENST00000414230 479 ntBASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 RPL31P45-201ENST00000419532 356 ntBASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 TCEA1P2-201ENST00000420496 906 ntBASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 AL139247.1-201ENST00000422768 325 ntBASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 UBDP1-202ENST00000457888 382 ntBASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 RNA5SP309-201ENST00000516670 106 ntBASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 RN7SL339P-201ENST00000580597 296 ntBASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 AC244505.7-201ENST00000599675 272 ntBASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 AL391597.1-201ENST00000618707 694 ntBASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 DCAF13P1-201ENST00000495256 1330 ntBASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.46□□□□□ -1.7
CTNNA3Q9UI47 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 SNORA9-201ENST00000384215 133 ntBASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 HSPE1P8-201ENST00000406997 288 ntBASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 AC004987.3-201ENST00000413879 771 ntBASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 AC105402.2-201ENST00000438503 358 ntBASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 EXTL2P1-201ENST00000446218 416 ntBASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 PDSS1P2-201ENST00000449397 678 ntBASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 AC006499.5-201ENST00000505037 514 ntBASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 AC021146.1-201ENST00000511202 716 ntBASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 AL109741.3-201ENST00000561748 592 ntBASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 AGGF1P8-201ENST00000562979 1000 ntBASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 AC135803.1-201ENST00000608748 565 ntBASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 AL121772.2-201ENST00000614331 297 ntBASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTNNA3Q9UI47 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTNNA3Q9UI47 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.44□□□□□ -1.7
CTNNA3Q9UI47 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTNNA3Q9UI47 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
CTNNA3Q9UI47 MIR34B-201ENST00000385076 84 ntBASIC4.44□□□□□ -1.7
CTNNA3Q9UI47 RNU6-564P-201ENST00000410983 104 ntBASIC4.44□□□□□ -1.7
CTNNA3Q9UI47 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.44□□□□□ -1.7
CTNNA3Q9UI47 AC127526.1-201ENST00000417526 366 ntBASIC4.44□□□□□ -1.7
CTNNA3Q9UI47 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTNNA3Q9UI47 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.44□□□□□ -1.7
CTNNA3Q9UI47 AC010307.1-201ENST00000467206 836 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms