Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 ZNF962P-201ENST00000443465 3140 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLCF1Q9UBD9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLCF1Q9UBD9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 Y_RNA.110-201ENST00000363220 99 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 OR52E6-202ENST00000379946 954 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC007066.1-201ENST00000392902 381 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 HMGB3P18-201ENST00000406327 590 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 JKAMPP1-201ENST00000413804 919 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AL049737.1-201ENST00000413920 1403 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 TCEA1P2-201ENST00000420496 906 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AL139247.1-201ENST00000422768 325 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 RWDD4P2-201ENST00000426392 563 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC093422.3-201ENST00000428506 305 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 YWHAEP5-201ENST00000431545 765 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 ELOCP11-201ENST00000436690 332 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 ELOCP16-201ENST00000444494 332 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC017099.1-201ENST00000448261 1028 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 NDUFS5P3-201ENST00000450668 321 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC011037.1-201ENST00000483964 558 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 RWDD4P1-201ENST00000488019 565 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC008802.1-201ENST00000519121 791 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC022695.1-201ENST00000522089 237 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC022790.1-201ENST00000522872 204 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 OR4A2P-201ENST00000527276 913 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC135001.1-201ENST00000544546 283 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 OR4U1P-201ENST00000554958 912 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AL136520.1-202ENST00000555494 763 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC104229.1-201ENST00000561364 255 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 MIR5187-201ENST00000583479 76 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC125494.3-201ENST00000602759 455 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AL391497.1-201ENST00000608671 547 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 STMN1P1-201ENST00000617809 440 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC233309.1-201ENST00000619522 751 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC008432.1-201ENST00000615912 1320 ntBASIC3.4□□□□□ -1.87
CLCF1Q9UBD9 AC007529.1-201ENST00000418574 2178 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC017007.4-201ENST00000503353 1352 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 ZNF285B-201ENST00000561698 1767 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 MIR16-2-201ENST00000362117 81 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 RNA5SP27-201ENST00000363839 119 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 ATF1P1-201ENST00000406040 927 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 MTATP6P31-201ENST00000406985 692 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 PTGES3P2-201ENST00000407942 482 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 RNU4-27P-201ENST00000410889 139 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AL158050.1-201ENST00000416077 457 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AL606495.1-201ENST00000422100 813 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC073310.1-201ENST00000423226 1033 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 RPL30P3-201ENST00000424262 333 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC011742.1-201ENST00000431448 434 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 ARL4AP4-201ENST00000434170 518 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 ELOCP8-201ENST00000439309 332 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 RPS7P5-201ENST00000441482 581 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 TPTE2P3-201ENST00000441562 1189 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 ELOCP15-201ENST00000442090 332 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 SETD6P1-201ENST00000444575 317 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 RPL6P5-201ENST00000445678 828 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 VN1R34P-201ENST00000447387 883 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 RPL30P11-201ENST00000495304 339 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AL035404.1-201ENST00000497982 568 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms