Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AC022832.1-201ENST00000530718 645 ntBASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 OR4A12P-201ENST00000530847 918 ntBASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 HPRT1P3-201ENST00000539521 576 ntBASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 IGBP1P1-201ENST00000554337 1009 ntBASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AL845331.3-202ENST00000562856 261 ntBASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AC015917.1-201ENST00000579654 510 ntBASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AC011840.5-201ENST00000582125 771 ntBASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AL161729.3-201ENST00000603533 673 ntBASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AC011816.2-201ENST00000607089 556 ntBASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 MIR1302-2-201ENST00000607096 138 ntBASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AL050343.2-201ENST00000607338 280 ntBASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AC007938.2-201ENST00000604666 2634 ntBASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.94□□□□□ -1.62
SEC61A2Q9H9S3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC092376.2-201ENST00000622621 4116 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 ASNSP1-204ENST00000641977 1664 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 GNG5P1-201ENST00000255500 204 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 RNA5SP46-201ENST00000362370 120 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 Y_RNA.58-201ENST00000362807 102 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 Y_RNA.154-201ENST00000363624 102 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 RNA5SP435-201ENST00000364044 108 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 RNY3P1-201ENST00000365085 102 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 RNY3-201ENST00000365484 102 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 Y_RNA.381-201ENST00000365666 102 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 Y_RNA.490-201ENST00000384413 102 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 RNA5SP178-201ENST00000410380 128 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AL354751.2-201ENST00000415471 210 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 RPL34P3-201ENST00000421454 338 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AL589872.1-201ENST00000426602 288 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC023347.2-201ENST00000433994 462 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AL596266.1-201ENST00000448132 400 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC023141.9-201ENST00000458734 412 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 RN7SL188P-201ENST00000469842 285 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 RN7SL717P-201ENST00000478343 297 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 RPL35P6-201ENST00000490024 372 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC106872.3-201ENST00000495104 446 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC006390.1-201ENST00000508068 283 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 RNA5SP362-201ENST00000516048 118 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 Y_RNA.672-201ENST00000516289 104 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC090502.2-201ENST00000549267 280 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC245014.2-201ENST00000603689 287 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AL136363.1-201ENST00000605349 337 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC246785.4-201ENST00000605374 287 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms