Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.89□□□□□ -1.79
NXF3Q9H4D5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NXF3Q9H4D5 AL049781.1-201ENST00000623195 3585 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NXF3Q9H4D5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.89□□□□□ -1.79
NXF3Q9H4D5 RNU6-666P-201ENST00000363499 107 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 SNORA62.2-201ENST00000364672 152 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 Y_RNA.333-201ENST00000365274 102 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 RNU6-152P-201ENST00000384037 107 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 MIR3074-201ENST00000384885 81 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 MIR92A2-201ENST00000385299 75 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NXF3Q9H4D5 AC048351.1-201ENST00000420064 602 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NXF3Q9H4D5 AL356535.1-201ENST00000440335 398 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 HMGB1P16-201ENST00000447155 540 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 CYCSP35-201ENST00000451978 304 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 FTH1P24-201ENST00000503502 462 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NXF3Q9H4D5 AC067904.2-201ENST00000517322 1283 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 IGHV3-32-201ENST00000519182 355 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 AC087272.1-201ENST00000523624 533 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.89□□□□□ -1.79
NXF3Q9H4D5 AC092868.3-201ENST00000560515 784 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 RN7SL339P-201ENST00000580597 296 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 AC005412.1-201ENST00000580812 1049 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 AC007179.3-201ENST00000604976 235 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 U4.6-201ENST00000621618 127 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.89□□□□□ -1.79
NXF3Q9H4D5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.89□□□□□ -1.79
NXF3Q9H4D5 PRO1804-201ENST00000623780 2050 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 AC008725.1-201ENST00000605123 2263 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NXF3Q9H4D5 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.89□□□□□ -1.79
NXF3Q9H4D5 AC017007.4-201ENST00000503353 1352 ntBASIC3.89□□□□□ -1.79
NXF3Q9H4D5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 XIAPP3-201ENST00000312918 795 ntBASIC3.88□□□□□ -1.79
NXF3Q9H4D5 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 RN7SKP56-201ENST00000410513 331 ntBASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 SDCBPP2-201ENST00000424643 885 ntBASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AC008155.2-201ENST00000464337 397 ntBASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AC010683.1-201ENST00000473673 378 ntBASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AC025518.1-201ENST00000479856 347 ntBASIC3.88□□□□□ -1.79
NXF3Q9H4D5 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AC074250.1-201ENST00000511117 192 ntBASIC3.88□□□□□ -1.79
NXF3Q9H4D5 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 RNU6-491P-201ENST00000516099 110 ntBASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AC006077.1-201ENST00000604746 343 ntBASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AL359715.5-201ENST00000623431 443 ntBASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AC096656.1-201ENST00000623826 1364 ntBASIC3.88□□□□□ -1.79
NXF3Q9H4D5 AL031985.3-201ENST00000565390 2449 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NXF3Q9H4D5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NXF3Q9H4D5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.87□□□□□ -1.79
NXF3Q9H4D5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NXF3Q9H4D5 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.87□□□□□ -1.79
NXF3Q9H4D5 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
NXF3Q9H4D5 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.87□□□□□ -1.79
NXF3Q9H4D5 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.87□□□□□ -1.79
NXF3Q9H4D5 RNU6-761P-201ENST00000384148 107 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 RNVU1-14-201ENST00000384770 164 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 MIR34B-201ENST00000385076 84 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NXF3Q9H4D5 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NXF3Q9H4D5 AL589655.1-201ENST00000405398 482 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 HSPE1P8-201ENST00000406997 288 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 MTHFD2P2-201ENST00000407725 247 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 USP12PY-201ENST00000427677 1064 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 FTH1P6-201ENST00000430768 320 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 MRPS33P4-201ENST00000434892 317 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 AF228730.2-201ENST00000438784 848 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 AL627224.1-201ENST00000448334 444 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 AL500527.1-201ENST00000448532 255 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 RBMY2UP-201ENST00000453474 324 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.87□□□□□ -1.79
NXF3Q9H4D5 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.87□□□□□ -1.79
NXF3Q9H4D5 RNU7-27P-201ENST00000459281 62 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 RPS4XP10-201ENST00000465034 731 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 AC005912.1-201ENST00000495392 255 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 WBP1LP4-201ENST00000505043 344 ntBASIC3.87□□□□□ -1.79
NXF3Q9H4D5 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms