Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC127459.3-201ENST00000624328 466 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AC008013.2-202ENST00000637965 364 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AC068870.3-201ENST00000625077 2536 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AL359396.1-201ENST00000623151 2376 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AC090017.1-201ENST00000548612 1779 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 Y_RNA.29-201ENST00000362570 113 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 RNA5SP388-201ENST00000362584 119 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 RNU6-490P-201ENST00000362985 107 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 SNORD113-7-201ENST00000363762 77 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 RNU6-740P-201ENST00000364734 105 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 RNU6-328P-201ENST00000390887 106 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 RNU6-1093P-201ENST00000391194 107 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 SNORA75.6-201ENST00000391318 127 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 PCNPP3-201ENST00000393579 471 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 MIR1252-201ENST00000408861 65 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AL138799.3-201ENST00000438968 350 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 RPS23P7-201ENST00000466210 444 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AC079080.1-201ENST00000479841 822 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 ALDH7A1P3-201ENST00000492517 345 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 SUMO2P4-201ENST00000504193 276 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 RNU6-1212P-201ENST00000517023 104 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 OR5D17P-201ENST00000531492 978 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AP001804.2-201ENST00000533932 910 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 GLUD1P2-201ENST00000583339 201 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AC126915.2-201ENST00000610957 190 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AC025162.2-201ENST00000619602 560 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AC103858.2-201ENST00000621471 543 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 AC009166.2-201ENST00000624410 2833 ntBASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL25A1Q9BXS0 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC012254.3-201ENST00000591183 2117 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms