Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP4Q99569 HIGD1AP12-201ENST00000427832 281 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AL390023.1-201ENST00000428836 262 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP4Q99569 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP4Q99569 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP4Q99569 THAP5P1-201ENST00000439089 262 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.32□□□□□ -1.72
PKP4Q99569 ARL4AP3-201ENST00000441452 574 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AL050341.1-201ENST00000447743 313 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 DDX39BP2-208ENST00000453923 258 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.32□□□□□ -1.72
PKP4Q99569 NDUFA12P1-201ENST00000455914 406 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AC069528.1-202ENST00000482888 637 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.32□□□□□ -1.72
PKP4Q99569 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP4Q99569 Y_RNA.655-201ENST00000515919 96 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 RNU6-1129P-201ENST00000515964 104 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP4Q99569 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.32□□□□□ -1.72
PKP4Q99569 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP4Q99569 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
PKP4Q99569 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP4Q99569 CR383656.6-201ENST00000550518 394 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.32□□□□□ -1.72
PKP4Q99569 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP4Q99569 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP4Q99569 AL354943.1-201ENST00000572103 781 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PKP4Q99569 NBR2-204ENST00000587322 63 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.32□□□□□ -1.72
PKP4Q99569 AC234771.5-201ENST00000600161 514 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AC018638.7-201ENST00000605836 1114 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP4Q99569 AC009237.15-201ENST00000610252 501 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AC012409.3-201ENST00000611343 981 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AL392048.1-201ENST00000613946 534 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AL353726.1-201ENST00000614041 1000 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AC073569.3-201ENST00000619055 682 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AL603755.1-201ENST00000619504 163 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.32□□□□□ -1.72
PKP4Q99569 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP4Q99569 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.32□□□□□ -1.72
PKP4Q99569 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PKP4Q99569 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PKP4Q99569 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PKP4Q99569 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
PKP4Q99569 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PKP4Q99569 AC012020.1-201ENST00000624541 1728 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PKP4Q99569 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP4Q99569 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
PKP4Q99569 SNORD113-6-201ENST00000363345 75 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 RN7SKP44-201ENST00000363602 316 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 RNU1-44P-201ENST00000384453 163 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 RPS20P14-201ENST00000412545 360 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 RAP1BP1-201ENST00000412709 553 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 CEACAMP8-201ENST00000413902 580 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 AC009237.10-201ENST00000414112 510 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP4Q99569 SEPT2P1-201ENST00000419651 180 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.31□□□□□ -1.72
PKP4Q99569 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP4Q99569 RPP40P1-201ENST00000426762 456 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.31□□□□□ -1.72
PKP4Q99569 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.31□□□□□ -1.72
PKP4Q99569 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.31□□□□□ -1.72
PKP4Q99569 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.31□□□□□ -1.72
PKP4Q99569 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP4Q99569 GSTA7P-201ENST00000438425 448 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.31□□□□□ -1.72
PKP4Q99569 RPS27AP15-201ENST00000447672 466 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP4Q99569 AC104978.1-201ENST00000449387 391 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP4Q99569 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP4Q99569 AC005008.1-201ENST00000456151 612 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP4Q99569 AC053481.1-201ENST00000467217 306 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 RAP1BP2-201ENST00000478270 544 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 RPL21P103-201ENST00000479921 488 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 RN7SL817P-201ENST00000480777 288 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 OR5BM1P-201ENST00000512021 366 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.31□□□□□ -1.72
PKP4Q99569 HMGB1P23-201ENST00000518743 568 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.31□□□□□ -1.72
PKP4Q99569 AC090151.1-201ENST00000520784 730 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.31□□□□□ -1.72
PKP4Q99569 HMGB1P1-201ENST00000522557 636 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP4Q99569 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.31□□□□□ -1.72
PKP4Q99569 PTP4A1P6-201ENST00000531034 478 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP4Q99569 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP4Q99569 ATP5F1P7-201ENST00000567330 760 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 AC015688.2-201ENST00000584523 262 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.31□□□□□ -1.72
PKP4Q99569 AC018926.3-201ENST00000618841 406 ntBASIC4.31□□□□□ -1.72
PKP4Q99569 AP000676.3-201ENST00000623299 569 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms