Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SAMMSON-210ENST00000641260 1308 ntBASIC6.91□□□□□ -1.3
PHOX2BQ99453 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PHOX2BQ99453 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.91□□□□□ -1.3
PHOX2BQ99453 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PHOX2BQ99453 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.91□□□□□ -1.3
PHOX2BQ99453 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PHOX2BQ99453 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC6.91□□□□□ -1.3
PHOX2BQ99453 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PHOX2BQ99453 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.91□□□□□ -1.3
PHOX2BQ99453 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PHOX2BQ99453 AC011008.2-201ENST00000624866 3352 ntBASIC6.91□□□□□ -1.3
PHOX2BQ99453 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PHOX2BQ99453 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.91□□□□□ -1.3
PHOX2BQ99453 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PHOX2BQ99453 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PHOX2BQ99453 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
PHOX2BQ99453 CDY19P-201ENST00000411668 1613 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 CDY18P-201ENST00000438294 1609 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
PHOX2BQ99453 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PHOX2BQ99453 PRNCR1-201ENST00000635449 12727 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PHOX2BQ99453 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PHOX2BQ99453 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PHOX2BQ99453 AL021877.2-201ENST00000624442 10684 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PHOX2BQ99453 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
PHOX2BQ99453 SNORD62.1-201ENST00000362541 86 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 Y_RNA.350-201ENST00000365409 98 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 RNU6-393P-201ENST00000384475 107 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 SNORD70.1-201ENST00000391007 85 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 AL109755.1-201ENST00000401791 649 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 AC016027.5-201ENST00000427227 210 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 MYL6P3-201ENST00000436904 432 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 AC112492.4-201ENST00000456549 352 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 RN7SL610P-201ENST00000463845 291 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 RPS23P3-201ENST00000470993 430 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 AC007998.1-201ENST00000474156 672 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 RN7SL273P-201ENST00000481561 299 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 RPS23P1-201ENST00000491662 432 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 RNU6-347P-201ENST00000516658 105 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PHOX2BQ99453 AC131281.1-201ENST00000522984 164 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 AC007068.2-201ENST00000543168 395 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 MIR4437-201ENST00000581331 60 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 AC006254.3-201ENST00000603353 884 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 CR382285.1-202ENST00000604687 547 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 AC023813.4-201ENST00000607580 580 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 AL355810.1-201ENST00000614629 552 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 AP005212.3-201ENST00000619964 528 ntBASIC6.9□□□□□ -1.3
PHOX2BQ99453 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.9□□□□□ -1.3
PHOX2BQ99453 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PHOX2BQ99453 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PHOX2BQ99453 SHQ1P1-201ENST00000437111 1544 ntBASIC6.9□□□□□ -1.31
PHOX2BQ99453 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
PHOX2BQ99453 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PHOX2BQ99453 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.9□□□□□ -1.31
PHOX2BQ99453 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PHOX2BQ99453 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PHOX2BQ99453 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
PHOX2BQ99453 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PHOX2BQ99453 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PHOX2BQ99453 AC091812.1-201ENST00000432235 1948 ntBASIC6.89□□□□□ -1.31
PHOX2BQ99453 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.89□□□□□ -1.31
PHOX2BQ99453 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.89□□□□□ -1.31
PHOX2BQ99453 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PHOX2BQ99453 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PHOX2BQ99453 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PHOX2BQ99453 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
PHOX2BQ99453 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
PHOX2BQ99453 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
PHOX2BQ99453 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PHOX2BQ99453 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
PHOX2BQ99453 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PHOX2BQ99453 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.89□□□□□ -1.31
PHOX2BQ99453 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.89□□□□□ -1.31
PHOX2BQ99453 Y_RNA.117-201ENST00000363294 101 ntBASIC6.89□□□□□ -1.31
PHOX2BQ99453 U3.25-201ENST00000391209 220 ntBASIC6.89□□□□□ -1.31
PHOX2BQ99453 MIR1252-201ENST00000408861 65 ntBASIC6.89□□□□□ -1.31
PHOX2BQ99453 RNA5SP178-201ENST00000410380 128 ntBASIC6.89□□□□□ -1.31
PHOX2BQ99453 GEMIN2P2-201ENST00000418195 715 ntBASIC6.89□□□□□ -1.31
PHOX2BQ99453 AL161722.2-201ENST00000434731 981 ntBASIC6.89□□□□□ -1.31
PHOX2BQ99453 PNKDP1-201ENST00000435914 430 ntBASIC6.89□□□□□ -1.31
PHOX2BQ99453 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.89□□□□□ -1.31
PHOX2BQ99453 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms