Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 Y_RNA.18-201ENST00000362461 102 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 Y_RNA.162-201ENST00000363683 102 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 SNORA4.1-201ENST00000364263 144 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AL035079.1-201ENST00000405210 287 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AF228730.4-201ENST00000421457 183 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 HSPE1P16-201ENST00000426640 348 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 YWHAEP5-201ENST00000431545 765 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AC234064.1-201ENST00000436312 247 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 RPL34P20-201ENST00000442771 351 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AL591363.1-201ENST00000450091 483 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 IGHV5-78-201ENST00000450948 295 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 VPS26AP1-201ENST00000483197 979 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 NIPA2P2-201ENST00000496376 1083 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AC025459.1-201ENST00000504072 156 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 ATP1B1P1-201ENST00000509767 915 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 TVP23CP2-201ENST00000571473 623 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 MIR3913-1-201ENST00000577744 102 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AP001429.1-201ENST00000602568 530 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AC091304.9-201ENST00000612091 226 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AC002553.4-201ENST00000616896 331 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AL158209.2-201ENST00000619266 216 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 AC009033.1-201ENST00000624279 431 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 PCAT14-202ENST00000627127 3935 ntBASIC5.26□□□□□ -1.57
CDK5RAP1Q96SZ6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 RNA5SP123-201ENST00000363244 119 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 RNU6-297P-201ENST00000384636 107 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 SNORD65-201ENST00000391079 73 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 ATP5HP3-201ENST00000396994 486 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 MTCYBP36-201ENST00000404146 440 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 SNORA77-201ENST00000408716 125 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC00993-201ENST00000420453 540 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 ELOCP14-201ENST00000428070 331 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 PSMD10P3-201ENST00000437000 448 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AL772161.1-201ENST00000439130 476 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC092427.1-201ENST00000439177 601 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 ELOCP7-201ENST00000439968 331 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 NPM1P39-201ENST00000449818 867 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AL591623.2-201ENST00000449978 222 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 IGBP1P5-201ENST00000507524 1000 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC109445.1-201ENST00000512356 383 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC010342.1-201ENST00000514047 877 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AP002453.2-201ENST00000533503 320 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC008033.2-201ENST00000542626 177 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC012182.1-201ENST00000570133 895 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 UBE2V2P2-201ENST00000587677 504 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC020910.2-201ENST00000603635 610 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms