Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC025125.1-201ENST00000624743 1922 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 HMGN2P8-201ENST00000391458 268 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 Z86062.1-201ENST00000406773 777 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 PTP4A1P5-201ENST00000420305 455 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 AC245054.1-201ENST00000420944 258 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 RPL21P109-201ENST00000422213 475 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 AL031736.2-201ENST00000426573 787 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 NDUFB1P1-201ENST00000435191 180 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 AF228730.2-201ENST00000438784 848 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 RPS3AP46-201ENST00000448352 682 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 AC025459.1-201ENST00000504072 156 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 HMGN1P11-201ENST00000508668 303 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 RN7SKP82-201ENST00000516786 223 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 AC026403.1-201ENST00000518938 295 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 PTP4A1P6-201ENST00000531034 478 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 AC008011.1-201ENST00000545989 227 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 AL121766.1-201ENST00000547436 487 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 MTND4LP24-201ENST00000572277 291 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 AC020914.6-201ENST00000594327 272 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 BRDTP1-201ENST00000605735 677 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 AP003117.2-201ENST00000606010 545 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 AP004607.9-201ENST00000618202 316 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 AC004943.3-201ENST00000624116 600 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 DCAF13P1-201ENST00000495256 1330 ntBASIC3.69□□□□□ -1.82
ECHDC3Q96DC8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 RNA5SP322-201ENST00000363617 119 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 RNU6-452P-201ENST00000384406 107 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 RNU1-89P-201ENST00000384592 164 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 MTHFD2P2-201ENST00000407725 247 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 RN7SKP27-201ENST00000410684 333 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AC010385.1-201ENST00000412374 256 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AC105402.1-201ENST00000413336 545 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AC004987.3-201ENST00000413879 771 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 HMGB3P20-201ENST00000417997 600 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 IFNNP1-201ENST00000429219 553 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 HMGB1P16-201ENST00000447155 540 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AC239367.2-201ENST00000447309 705 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AC099563.1-201ENST00000456086 418 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 RPL21P129-201ENST00000491732 478 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 FTH1P24-201ENST00000503502 462 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AC010285.3-201ENST00000511668 676 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AP002812.4-201ENST00000532139 286 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AC012414.2-201ENST00000559474 187 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AC115085.1-201ENST00000588924 229 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 MIR486-1-201ENST00000612171 68 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 AC119674.1-207ENST00000641355 633 ntBASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ECHDC3Q96DC8 USP8P1-201ENST00000494673 3183 ntBASIC3.67□□□□□ -1.82
ECHDC3Q96DC8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
ECHDC3Q96DC8 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ECHDC3Q96DC8 AC083899.2-201ENST00000423285 1376 ntBASIC3.67□□□□□ -1.82
ECHDC3Q96DC8 SNORA62.3-201ENST00000365110 153 ntBASIC3.67□□□□□ -1.82
ECHDC3Q96DC8 RNA5SP167-201ENST00000365461 116 ntBASIC3.67□□□□□ -1.82
ECHDC3Q96DC8 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.67□□□□□ -1.82
ECHDC3Q96DC8 ATP5F1P3-201ENST00000397213 657 ntBASIC3.67□□□□□ -1.82
ECHDC3Q96DC8 ATP5F1P4-201ENST00000397288 746 ntBASIC3.67□□□□□ -1.82
ECHDC3Q96DC8 RN7SKP56-201ENST00000410513 331 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms