Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.2□□□□□ -1.58
HPS3Q969F9 AC096632.1-201ENST00000427395 310 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 NRBF2P3-201ENST00000432731 865 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS3Q969F9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS3Q969F9 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HPS3Q969F9 MTND6P18-201ENST00000439477 513 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 MTND2P4-201ENST00000445034 1004 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS3Q969F9 MRPL48P1-201ENST00000445390 636 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HPS3Q969F9 RPL18AP17-201ENST00000455326 198 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.2□□□□□ -1.58
HPS3Q969F9 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.2□□□□□ -1.58
HPS3Q969F9 CYCSP34-201ENST00000458172 304 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.2□□□□□ -1.58
HPS3Q969F9 AP000893.1-201ENST00000474462 794 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 OR4G11P-201ENST00000492842 939 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 HMGB3P13-201ENST00000511263 607 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.2□□□□□ -1.58
HPS3Q969F9 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.2□□□□□ -1.58
HPS3Q969F9 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.2□□□□□ -1.58
HPS3Q969F9 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.2□□□□□ -1.58
HPS3Q969F9 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.2□□□□□ -1.58
HPS3Q969F9 BRD9P1-201ENST00000529855 560 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 OR4A12P-201ENST00000530847 918 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 AC084824.1-201ENST00000550917 1005 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 EDDM3DP-201ENST00000554692 434 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 SULT1C2P1-202ENST00000562418 459 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 AC015912.2-201ENST00000571053 181 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 MIR4716-201ENST00000579628 84 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 MIR3667-201ENST00000581025 74 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS3Q969F9 AC005191.1-201ENST00000603950 358 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 AC018714.1-201ENST00000605028 208 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 AP001521.1-201ENST00000609150 300 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 AC084782.3-201ENST00000612282 578 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 AC092184.1-201ENST00000625042 715 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS3Q969F9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HPS3Q969F9 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS3Q969F9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS3Q969F9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HPS3Q969F9 AC114546.3-201ENST00000623582 1734 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.2□□□□□ -1.58
HPS3Q969F9 AC007529.1-201ENST00000418574 2178 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HPS3Q969F9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HPS3Q969F9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
HPS3Q969F9 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HPS3Q969F9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.19□□□□□ -1.58
HPS3Q969F9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HPS3Q969F9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HPS3Q969F9 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.19□□□□□ -1.58
HPS3Q969F9 AP000580.1-201ENST00000404439 358 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 RN7SKP100-201ENST00000411258 284 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 AC073136.2-201ENST00000417282 849 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HPS3Q969F9 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.19□□□□□ -1.58
HPS3Q969F9 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.19□□□□□ -1.58
HPS3Q969F9 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.19□□□□□ -1.58
HPS3Q969F9 AC005154.2-201ENST00000438110 379 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 ISCA1P2-201ENST00000438679 421 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 ELOCP8-201ENST00000439309 332 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 ELOCP15-201ENST00000442090 332 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 AC118469.1-201ENST00000442943 488 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.19□□□□□ -1.58
HPS3Q969F9 MTND1P29-201ENST00000448112 647 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.19□□□□□ -1.58
HPS3Q969F9 AC009961.3-201ENST00000449832 765 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.19□□□□□ -1.58
HPS3Q969F9 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.19□□□□□ -1.58
HPS3Q969F9 MTCO3P16-201ENST00000454456 754 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 CCDC75P1-201ENST00000469247 791 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HPS3Q969F9 AC083982.1-201ENST00000485679 344 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 RPS4XP18-201ENST00000495480 763 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 AC092045.1-201ENST00000495716 1231 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 AC005178.1-201ENST00000508392 440 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 RNY4P37-201ENST00000516225 96 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 RNU1-6P-201ENST00000516290 144 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 NPM1P6-201ENST00000521088 871 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.19□□□□□ -1.58
HPS3Q969F9 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.19□□□□□ -1.58
HPS3Q969F9 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.19□□□□□ -1.58
HPS3Q969F9 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.19□□□□□ -1.58
HPS3Q969F9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HPS3Q969F9 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.19□□□□□ -1.58
HPS3Q969F9 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 MIR4504-201ENST00000577413 92 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 AC209154.1-201ENST00000582156 337 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 SNORD39.3-201ENST00000584451 71 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 AC107982.3-201ENST00000584957 985 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HPS3Q969F9 AL358072.1-201ENST00000604156 575 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 HSPE1P14-201ENST00000605812 302 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 OR2AS2P-201ENST00000606902 342 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.19□□□□□ -1.58
HPS3Q969F9 FAM25E-202ENST00000608562 189 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms