Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 DCAF13P3-201ENST00000561147 1334 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC008549.2-201ENST00000333482 706 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 RNU6-492P-201ENST00000363035 104 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 RNU6-560P-201ENST00000364007 108 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 SNORD116-23-201ENST00000384645 92 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 MIR513B-201ENST00000385136 84 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AL161909.1-201ENST00000397390 712 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 RN7SKP199-201ENST00000410325 305 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 RPL22P18-201ENST00000417197 377 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 B3GNT2P1-201ENST00000434960 952 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC093155.1-201ENST00000440164 826 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 MTCO2P25-201ENST00000447065 681 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AL445433.1-201ENST00000457507 257 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC011979.1-201ENST00000472300 483 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 RPS3AP6-201ENST00000484430 795 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC021146.5-201ENST00000503544 545 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC098862.1-201ENST00000504991 413 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 SNX5P1-201ENST00000505757 1041 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC114322.1-201ENST00000506771 926 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 RNU6-885P-201ENST00000516607 104 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AP000619.3-201ENST00000535634 1127 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC023050.2-201ENST00000544968 387 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 MTATP6P24-201ENST00000576835 677 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC090312.1-201ENST00000580637 348 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC011330.2-201ENST00000621680 635 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AP000676.4-201ENST00000624659 623 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AC140479.6-201ENST00000633535 357 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 CPHL1P-201ENST00000461341 3407 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AL592437.2-201ENST00000421655 2434 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AL158163.1-201ENST00000603915 1649 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 Y_RNA.465-201ENST00000384293 102 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 MTCO3P31-201ENST00000405526 789 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 SNORA11F-201ENST00000408237 128 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 RN7SKP247-201ENST00000411094 308 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 RPS24P7-201ENST00000416921 246 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AL356095.1-201ENST00000417217 199 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 MTCO2P21-201ENST00000419780 677 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 CKS1BP6-201ENST00000424932 240 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 UBE2V1P1-201ENST00000430836 445 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC241584.1-201ENST00000438469 1241 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 NF1P3-201ENST00000457709 450 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC022795.1-201ENST00000473808 480 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC020890.1-201ENST00000491837 504 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 HMGB1P21-201ENST00000502313 581 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms