Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CFTRP1-201ENST00000456646 183 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 RPL7L1P8-201ENST00000469911 741 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 RPL21P103-201ENST00000479921 488 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC092451.1-201ENST00000480211 153 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 PCBP2P3-201ENST00000509726 843 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 MTCO1P30-201ENST00000515244 580 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 MTND5P21-201ENST00000531961 522 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC025918.2-201ENST00000558683 763 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 LLPHP1-201ENST00000603571 367 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC079610.2-201ENST00000604818 690 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC113194.1-201ENST00000606037 500 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 RNU4-89P-201ENST00000607443 133 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC012531.5-201ENST00000611375 151 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AL445567.2-201ENST00000618935 498 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 CDRT1-208ENST00000630868 794 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 FRG1DP-201ENST00000635586 771 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AF001550.2-201ENST00000636643 217 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AL732372.2-225ENST00000642124 456 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 UBE2V1P15-201ENST00000407776 448 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AC023128.2-201ENST00000420880 1223 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 RPL18P10-201ENST00000425606 538 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AL500527.1-201ENST00000448532 255 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 RPS4XP15-201ENST00000489210 795 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 RPL7P47-201ENST00000497299 556 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 ARL2BPP6-201ENST00000512757 439 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 RN7SKP60-201ENST00000516985 239 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 IGKV2-23-201ENST00000518729 323 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 OR5AK3P-201ENST00000527486 1297 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AL139174.1-201ENST00000531489 886 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 TRAV15-201ENST00000556680 249 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AC090751.1-201ENST00000566966 267 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AP000919.1-202ENST00000581139 1264 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AC022146.1-201ENST00000595307 847 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AL365503.1-201ENST00000605247 905 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 U6.98-201ENST00000637157 84 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 OTUD4P1-201ENST00000237841 3067 ntBASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUDCD3Q8IVD9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
NUDCD3Q8IVD9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 RNA5SP391-201ENST00000363456 119 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 ZNF602P-201ENST00000405929 924 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 SNORA11B-201ENST00000408175 129 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 OR8G2P-201ENST00000412796 908 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 FAM204CP-201ENST00000424489 642 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 USP9YP31-201ENST00000431405 881 ntBASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.65□□□□□ -1.83
NUDCD3Q8IVD9 AC105402.2-201ENST00000438503 358 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms