Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC022790.1-201ENST00000522872 204 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRC28Q86X40 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC28Q86X40 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC28Q86X40 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC28Q86X40 AC027281.1-201ENST00000574178 758 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC28Q86X40 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRC28Q86X40 AC245389.1-201ENST00000605141 529 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 AC011816.2-201ENST00000607089 556 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC28Q86X40 CR392039.5-201ENST00000623201 510 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRC28Q86X40 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRC28Q86X40 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
LRRC28Q86X40 AL122126.1-201ENST00000546905 1318 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 DCAF13P3-201ENST00000561147 1334 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC28Q86X40 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LRRC28Q86X40 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC28Q86X40 SNORA48.7-201ENST00000391302 135 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 RNA5SP107-201ENST00000411358 122 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 AC093578.1-201ENST00000415219 368 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 AC096644.3-201ENST00000416788 338 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRC28Q86X40 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC28Q86X40 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.17□□□□□ -1.9
LRRC28Q86X40 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC28Q86X40 AL133547.1-201ENST00000448546 220 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 AC125238.1-201ENST00000448842 249 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC28Q86X40 AP002884.2-201ENST00000471647 395 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 AC021205.2-201ENST00000480069 347 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 ACTR3P3-201ENST00000480448 893 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.17□□□□□ -1.9
LRRC28Q86X40 RPL21P129-201ENST00000491732 478 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC28Q86X40 RNU2-27P-201ENST00000516185 142 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 SNORA67.7-201ENST00000516664 135 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 RNU6-579P-201ENST00000516879 102 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC28Q86X40 NPM1P35-201ENST00000533043 868 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 AC006518.1-201ENST00000541449 943 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 AP001180.3-201ENST00000582221 145 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 MIR3158-1-201ENST00000583596 81 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 AC008507.1-201ENST00000587506 734 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.17□□□□□ -1.9
LRRC28Q86X40 AL391497.1-201ENST00000608671 547 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 AL121772.2-201ENST00000614331 297 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 SNORA50A-202ENST00000629536 136 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC28Q86X40 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC28Q86X40 AC021755.1-201ENST00000559747 1447 ntBASIC3.17□□□□□ -1.9
LRRC28Q86X40 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LRRC28Q86X40 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRRC28Q86X40 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC007256.1-201ENST00000392253 2765 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LRRC28Q86X40 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LRRC28Q86X40 RNU6-225P-201ENST00000384613 103 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 U8.11-201ENST00000384699 133 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 U8.12-201ENST00000384701 133 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 MIR200C-201ENST00000384980 68 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LRRC28Q86X40 HMGB3P18-201ENST00000406327 590 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRC28Q86X40 RAB9AP3-201ENST00000412737 573 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC017079.2-201ENST00000416102 485 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC068533.1-201ENST00000418542 415 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC245291.1-201ENST00000419501 328 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 FAR1P1-201ENST00000427163 934 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 OR4F13P-201ENST00000428478 931 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRC28Q86X40 RPS7P5-201ENST00000441482 581 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRRC28Q86X40 RAB9AP1-201ENST00000449393 573 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRC28Q86X40 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRRC28Q86X40 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRC28Q86X40 U8.18-201ENST00000459285 133 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRC28Q86X40 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRC28Q86X40 AP002812.1-201ENST00000495378 474 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRC28Q86X40 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC005972.3-201ENST00000606304 481 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC006133.1-201ENST00000617106 264 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC039056.2-201ENST00000622261 511 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 AL732618.1-201ENST00000623251 301 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 AP003400.2-201ENST00000624036 666 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 MIR4278-201ENST00000636094 69 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 AC025125.1-201ENST00000624743 1922 ntBASIC3.16□□□□□ -1.9
LRRC28Q86X40 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRRC28Q86X40 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
LRRC28Q86X40 AL133383.2-201ENST00000622958 2336 ntBASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms