Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNU7-63P-201ENST00000459054 62 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 snoU13.29-201ENST00000459370 104 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 LSM3P4-201ENST00000502948 309 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC025674.1-201ENST00000507074 324 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC114781.3-201ENST00000512083 142 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 RNU6-764P-201ENST00000516396 105 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 RNU6-1220P-201ENST00000517126 108 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 NARSP2-201ENST00000518524 679 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC022616.6-201ENST00000520479 119 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC078899.1-201ENST00000521432 1185 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 OR5B10P-201ENST00000532869 642 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC027544.3-201ENST00000535082 757 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 HMGB1P6-201ENST00000569046 646 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 TXNP4-201ENST00000575018 310 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 RPL26P30-202ENST00000602923 645 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 MIR6809-201ENST00000612189 116 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC243773.3-201ENST00000613270 256 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 FAM157A-202ENST00000615155 405 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC104118.1-201ENST00000607625 1589 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 CCT8P1-201ENST00000413611 1657 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC006020.1-201ENST00000420179 1854 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AL591135.1-201ENST00000401578 5914 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 DBF4P1-201ENST00000412976 1892 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC005261.2-201ENST00000593427 4258 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 RNA5SP477-201ENST00000362639 119 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 Y_RNA.46-201ENST00000362695 102 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 Y_RNA.176-201ENST00000363815 109 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 Y_RNA.257-201ENST00000364596 102 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 SET-203ENST00000372688 801 ntTSL 2 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC117470.1-201ENST00000381974 330 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 SNORD3H-201ENST00000384486 214 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC092642.1-201ENST00000392417 425 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 RPL7P25-201ENST00000404151 721 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC096775.1-201ENST00000437724 448 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC073415.1-201ENST00000449240 153 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC104634.1-201ENST00000452720 462 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 FRG2FP-204ENST00000453982 852 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 GEMIN2P1-201ENST00000454246 752 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC090142.1-201ENST00000465776 462 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC025164.1-201ENST00000496249 478 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms