Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 HMGB1P11-201ENST00000413899 637 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 ATG4AP1-201ENST00000416893 538 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC092647.1-201ENST00000420654 287 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC093655.2-201ENST00000425735 631 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AL512649.1-201ENST00000428997 581 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC079807.1-201ENST00000429993 481 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 MTND5P14-201ENST00000441481 1267 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AL357520.1-201ENST00000441557 453 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 PAXBP1P1-201ENST00000449315 447 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 TPT1P13-201ENST00000449760 499 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC144530.1-201ENST00000452862 555 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 RPL31P50-201ENST00000471002 296 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC093809.1-201ENST00000509155 340 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 HIGD1AP3-201ENST00000515857 278 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC012400.1-201ENST00000518452 381 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC141257.3-201ENST00000572906 215 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AL589674.2-201ENST00000604304 337 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC011939.3-201ENST00000613686 466 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AL357080.1-201ENST00000617394 239 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AL133243.3-201ENST00000617415 3004 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AL022578.1-201ENST00000439330 1433 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 IQCB2P-201ENST00000401788 1633 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC097504.1-201ENST00000515103 2415 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AL359893.1-201ENST00000447628 1580 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 RNU6-501P-201ENST00000364072 100 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 MIR153-1-201ENST00000384914 90 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 RNA5SP372-201ENST00000390836 115 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AL049697.2-201ENST00000403708 294 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 NUDT19P3-201ENST00000404698 555 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 RPL21P108-201ENST00000413857 481 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC069213.2-201ENST00000420238 366 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 MTCO2P5-201ENST00000422621 426 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 GLRXP1-201ENST00000423261 334 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 VN1R108P-201ENST00000431580 830 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC127537.2-201ENST00000439258 465 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 MRPL48P1-201ENST00000445390 636 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 MTCO1P27-201ENST00000448269 226 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 MTND2P28-201ENST00000457540 1044 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC023141.9-201ENST00000458734 412 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC116337.2-201ENST00000477662 156 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 RN7SL717P-201ENST00000478343 297 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC113430.1-201ENST00000506872 718 ntBASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF220Q5VTB9 AC068587.4-201ENST00000533893 186 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms