Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 AC068724.1-201ENST00000487100 792 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 AC110794.1-201ENST00000505816 425 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 EEF1A1P37-201ENST00000522748 715 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 AP000926.4-201ENST00000527351 454 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 H3F3AP1-201ENST00000559984 334 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 MTND6P33-201ENST00000571794 183 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 AC068020.1-201ENST00000594215 661 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 AC006363.1-201ENST00000603806 463 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 NMD3P1-201ENST00000439704 1488 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 AL049780.3-201ENST00000624612 1583 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 AL672167.1-206ENST00000356293 943 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 IFNA11P-201ENST00000446352 526 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 AC112198.1-201ENST00000505369 1220 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 EIF1P6-201ENST00000600054 334 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 AL359535.1-201ENST00000612100 1087 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 MIR622-201ENST00000638396 96 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 LINC02471-203ENST00000641941 4752 ntBASIC3.16□□□□□ -1.9
RIF1Q5UIP0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
RIF1Q5UIP0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.15□□□□□ -1.9
RIF1Q5UIP0 NCOA4P2-201ENST00000340589 1813 ntBASIC3.15□□□□□ -1.9
RIF1Q5UIP0 RNA5SP42-201ENST00000364278 115 ntBASIC3.15□□□□□ -1.9
RIF1Q5UIP0 AC063976.3-201ENST00000426849 329 ntBASIC3.15□□□□□ -1.9
RIF1Q5UIP0 GTF3AP5-201ENST00000442645 697 ntBASIC3.15□□□□□ -1.9
RIF1Q5UIP0 RPL7P12-201ENST00000446719 750 ntBASIC3.15□□□□□ -1.9
RIF1Q5UIP0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.15□□□□□ -1.9
RIF1Q5UIP0 SEPT7P6-201ENST00000469999 1143 ntBASIC3.15□□□□□ -1.9
RIF1Q5UIP0 RN7SL594P-201ENST00000470590 287 ntBASIC3.15□□□□□ -1.9
RIF1Q5UIP0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RIF1Q5UIP0 UBA52P3-201ENST00000491303 382 ntBASIC3.15□□□□□ -1.9
RIF1Q5UIP0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.15□□□□□ -1.9
RIF1Q5UIP0 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.15□□□□□ -1.9
RIF1Q5UIP0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.15□□□□□ -1.9
RIF1Q5UIP0 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
RIF1Q5UIP0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RIF1Q5UIP0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
RIF1Q5UIP0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RIF1Q5UIP0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RIF1Q5UIP0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.15□□□□□ -1.91
RIF1Q5UIP0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RIF1Q5UIP0 U8.2-201ENST00000363156 134 ntBASIC3.15□□□□□ -1.91
RIF1Q5UIP0 AC233981.1-201ENST00000423224 461 ntBASIC3.15□□□□□ -1.91
RIF1Q5UIP0 AC005229.2-201ENST00000456995 399 ntBASIC3.15□□□□□ -1.91
RIF1Q5UIP0 RPS29P21-201ENST00000496272 170 ntBASIC3.15□□□□□ -1.91
RIF1Q5UIP0 ANXA2P1-201ENST00000505539 926 ntBASIC3.15□□□□□ -1.91
RIF1Q5UIP0 AC109458.1-201ENST00000508858 316 ntBASIC3.15□□□□□ -1.91
RIF1Q5UIP0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.15□□□□□ -1.91
RIF1Q5UIP0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.15□□□□□ -1.91
RIF1Q5UIP0 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.15□□□□□ -1.91
RIF1Q5UIP0 OR5AC4P-202ENST00000642086 985 ntBASIC3.15□□□□□ -1.91
RIF1Q5UIP0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RIF1Q5UIP0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RIF1Q5UIP0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 MIR133A2-201ENST00000347538 102 ntBASIC3.14□□□□□ -1.91
RIF1Q5UIP0 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 AC096638.2-201ENST00000434965 711 ntBASIC3.14□□□□□ -1.91
RIF1Q5UIP0 AL513328.1-201ENST00000446460 224 ntBASIC3.14□□□□□ -1.91
RIF1Q5UIP0 AC133134.1-201ENST00000466800 359 ntBASIC3.14□□□□□ -1.91
RIF1Q5UIP0 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 AC018552.3-201ENST00000567416 561 ntBASIC3.14□□□□□ -1.91
RIF1Q5UIP0 SNORD53-201ENST00000579969 78 ntBASIC3.14□□□□□ -1.91
RIF1Q5UIP0 AL034351.1-201ENST00000605288 668 ntBASIC3.14□□□□□ -1.91
RIF1Q5UIP0 AL592295.2-201ENST00000612578 206 ntBASIC3.14□□□□□ -1.91
RIF1Q5UIP0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.14□□□□□ -1.91
RIF1Q5UIP0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 AL356057.1-202ENST00000402263 756 ntBASIC3.14□□□□□ -1.91
RIF1Q5UIP0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 AC100770.1-201ENST00000532310 322 ntBASIC3.14□□□□□ -1.91
RIF1Q5UIP0 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms