Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.25□□□□□ -1.25
RC3H1Q5TC82 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 NUP58P1-201ENST00000502546 1738 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC011493.1-201ENST00000596753 1632 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 ERCC6-202ENST00000374127 1782 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 RNU1-77P-201ENST00000390868 162 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 MRPL42P2-201ENST00000403169 426 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 RN7SKP266-201ENST00000410232 287 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 RN7SKP247-201ENST00000411094 308 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 RNU6-1304P-201ENST00000411374 106 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 OFD1P1Y-201ENST00000411756 1225 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 SDAD1P3-201ENST00000427380 333 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 RBMY2QP-201ENST00000429799 1147 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 PSMD10P3-201ENST00000437000 448 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC002075.1-201ENST00000457396 676 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 APOOP2-201ENST00000461561 539 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC097493.1-201ENST00000463958 372 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC233702.1-201ENST00000482905 502 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 RN7SL97P-201ENST00000486780 299 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 FTH1P9-201ENST00000513251 355 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 RN7SKP288-201ENST00000516227 268 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC009812.2-201ENST00000517657 457 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AP000889.1-201ENST00000530968 660 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 APOOP3-201ENST00000536787 586 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC099489.2-201ENST00000574976 260 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC133644.2-201ENST00000608142 540 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AP004247.3-201ENST00000608682 624 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 Mico1.1-201ENST00000611698 204 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AC083806.3-201ENST00000614016 455 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AL118522.2-201ENST00000616045 615 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 AL354950.2-201ENST00000617939 290 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 MFSD8-219ENST00000641228 2559 ntBASIC7.24□□□□□ -1.25
RC3H1Q5TC82 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
RC3H1Q5TC82 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 RNU6-777P-201ENST00000364265 104 ntBASIC7.23□□□□□ -1.25
RC3H1Q5TC82 MDM4-202ENST00000367180 547 ntTSL 3 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 SET-203ENST00000372688 801 ntTSL 2 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 Y_RNA.615-201ENST00000410769 117 ntBASIC7.23□□□□□ -1.25
RC3H1Q5TC82 AC008267.5-201ENST00000424928 265 ntBASIC7.23□□□□□ -1.25
RC3H1Q5TC82 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 FABP7P2-201ENST00000429946 379 ntBASIC7.23□□□□□ -1.25
RC3H1Q5TC82 AL356276.2-201ENST00000435919 558 ntBASIC7.23□□□□□ -1.25
RC3H1Q5TC82 CEACAMP7-201ENST00000444105 496 ntBASIC7.23□□□□□ -1.25
RC3H1Q5TC82 FAM103A2P-201ENST00000444122 354 ntBASIC7.23□□□□□ -1.25
RC3H1Q5TC82 NF1P3-201ENST00000457709 450 ntBASIC7.23□□□□□ -1.25
RC3H1Q5TC82 RNU1-88P-201ENST00000459274 128 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms