Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC010469.2-201ENST00000496412 480 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 SNX18P23-201ENST00000510867 677 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 RN7SKP196-201ENST00000516267 345 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AC025423.5-201ENST00000550230 219 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 AL049779.2-201ENST00000553847 315 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AC093227.2-201ENST00000589357 285 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AL590032.1-201ENST00000604920 252 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 AC007619.2-201ENST00000605743 379 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 AC005514.1-201ENST00000623521 208 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 HSPA8P18-201ENST00000439846 1928 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AL606537.1-201ENST00000607258 2011 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 AC132219.2-201ENST00000624416 2327 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 OR52B5P-204ENST00000641744 3467 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 SNORA24.1-201ENST00000384401 135 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 MIR517A-201ENST00000385001 87 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 RPL21P109-201ENST00000422213 475 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 AL353597.2-202ENST00000434901 373 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 RPL23AP28-201ENST00000448062 470 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 AC108059.3-201ENST00000456388 214 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 AC015524.1-201ENST00000491585 472 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 AC005363.1-201ENST00000530779 351 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 AC140063.1-201ENST00000541343 259 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 AC136932.1-201ENST00000574771 208 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 FAM106CP-201ENST00000582212 507 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 AC010463.3-201ENST00000594077 500 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 AC241377.1-201ENST00000619797 406 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 NXPH1-205ENST00000602349 1953 ntBASIC7.29□□□□□ -1.24
VARS2Q5ST30 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARS2Q5ST30 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.29□□□□□ -1.24
VARS2Q5ST30 AC020978.6-201ENST00000571197 3177 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VARS2Q5ST30 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VARS2Q5ST30 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 RNY1P16-201ENST00000363063 111 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 RNU6-984P-201ENST00000363236 109 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 Y_RNA.292-201ENST00000364904 97 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms