Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC58Q4VC31 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC58Q4VC31 AC007656.2-201ENST00000624902 4547 ntBASIC3.16□□□□□ -1.9
CCDC58Q4VC31 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC58Q4VC31 AL157700.1-201ENST00000561973 1432 ntBASIC3.16□□□□□ -1.9
CCDC58Q4VC31 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC58Q4VC31 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC58Q4VC31 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC58Q4VC31 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC58Q4VC31 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC58Q4VC31 FAM91A3P-201ENST00000456826 2544 ntBASIC3.16□□□□□ -1.9
CCDC58Q4VC31 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCDC58Q4VC31 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC58Q4VC31 NMD3P1-201ENST00000439704 1488 ntBASIC3.16□□□□□ -1.9
CCDC58Q4VC31 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC58Q4VC31 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
CCDC58Q4VC31 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC58Q4VC31 MIR323B-201ENST00000385269 82 ntBASIC3.15□□□□□ -1.91
CCDC58Q4VC31 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 MTND4P22-201ENST00000413116 1169 ntBASIC3.15□□□□□ -1.91
CCDC58Q4VC31 RANP4-201ENST00000413361 655 ntBASIC3.15□□□□□ -1.91
CCDC58Q4VC31 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 RPL18P10-201ENST00000425606 538 ntBASIC3.15□□□□□ -1.91
CCDC58Q4VC31 AC073143.1-201ENST00000436316 395 ntBASIC3.15□□□□□ -1.91
CCDC58Q4VC31 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 RPS7P7-201ENST00000463499 571 ntBASIC3.15□□□□□ -1.91
CCDC58Q4VC31 RPL23AP67-201ENST00000465341 474 ntBASIC3.15□□□□□ -1.91
CCDC58Q4VC31 AP000563.1-201ENST00000490865 758 ntBASIC3.15□□□□□ -1.91
CCDC58Q4VC31 RN7SL323P-201ENST00000494712 295 ntBASIC3.15□□□□□ -1.91
CCDC58Q4VC31 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 KCTD9P5-201ENST00000504141 1170 ntBASIC3.15□□□□□ -1.91
CCDC58Q4VC31 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 FABP5P12-201ENST00000515543 389 ntBASIC3.15□□□□□ -1.91
CCDC58Q4VC31 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 AC034205.1-201ENST00000520621 638 ntBASIC3.15□□□□□ -1.91
CCDC58Q4VC31 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 AC105429.2-201ENST00000610567 517 ntBASIC3.15□□□□□ -1.91
CCDC58Q4VC31 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC58Q4VC31 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.15□□□□□ -1.91
CCDC58Q4VC31 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 RNA5SP383-201ENST00000362934 120 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 MIR153-1-201ENST00000384914 90 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 CCNB2P1-201ENST00000399411 1150 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 GSTA12P-201ENST00000402398 508 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AL034374.1-201ENST00000406329 351 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AL354719.1-201ENST00000406535 843 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 RPL5P18-201ENST00000406671 891 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC093578.1-201ENST00000415219 368 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC096644.3-201ENST00000416788 338 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 FAR1P1-201ENST00000427163 934 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 MTCYBP21-201ENST00000443300 1113 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AL161747.1-201ENST00000480068 358 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 FTH1P21-201ENST00000512179 511 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC104027.1-201ENST00000521887 300 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 IGKV2D-19-201ENST00000523346 262 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC007536.1-201ENST00000533382 349 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC023575.1-201ENST00000580510 358 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 MIR3939-201ENST00000582614 106 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC010928.3-201ENST00000587712 541 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC005344.1-201ENST00000613391 459 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 AC145207.9-201ENST00000623802 325 ntBASIC3.14□□□□□ -1.91
CCDC58Q4VC31 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC58Q4VC31 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 GTF2H2B-203ENST00000508065 1432 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms