Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC122108.2-201ENST00000611946 526 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 RN7SL722P-201ENST00000617780 284 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 RN7SL565P-201ENST00000618246 284 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AC009318.4-201ENST00000620496 486 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 DDX18P3-201ENST00000404856 2007 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AC013442.1-201ENST00000397347 228 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 MIR320C1-201ENST00000408566 88 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AC016397.1-201ENST00000412463 242 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 TPMTP2-201ENST00000414372 726 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AC092647.1-201ENST00000420654 287 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AC245028.1-201ENST00000423259 256 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 PRPF38AP2-201ENST00000438179 851 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 TPT1P13-201ENST00000449760 499 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 RPL7P31-201ENST00000450192 724 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 RPS24P16-201ENST00000497294 392 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AC140172.1-201ENST00000502928 141 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 MTND4P2-201ENST00000507767 1203 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 MTCO3P7-201ENST00000510008 774 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 OR7H2P-201ENST00000513483 306 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 IGLVIV-53-201ENST00000520107 367 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AC022861.1-201ENST00000522981 663 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 HNRNPCP4-201ENST00000571636 900 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AC090312.1-201ENST00000580637 348 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AP001981.2-201ENST00000603241 418 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AL008729.2-201ENST00000606393 473 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AC000123.2-201ENST00000623124 461 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AP000843.1-201ENST00000624880 701 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 AL139811.1-201ENST00000424779 2299 ntBASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC144BQ3MJ40 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.84□□□□□ -1.48
CCDC144BQ3MJ40 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC144BQ3MJ40 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
CCDC144BQ3MJ40 AC083843.2-201ENST00000568248 6253 ntBASIC5.84□□□□□ -1.48
CCDC144BQ3MJ40 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC144BQ3MJ40 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC144BQ3MJ40 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 RNA5SP428-201ENST00000365129 132 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 MIR192-201ENST00000384915 110 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 MIR589-201ENST00000385238 99 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AC007066.1-201ENST00000392902 381 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AC004987.3-201ENST00000413879 771 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AC012065.2-201ENST00000421295 375 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 MTCO2P5-201ENST00000422621 426 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 PSMA2P3-201ENST00000429685 675 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AC010153.1-201ENST00000432862 727 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 BMI1P1-201ENST00000445879 941 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms