Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HSPG2P98160 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HSPG2P98160 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HSPG2P98160 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.99□□□□□ -2.09
HSPG2P98160 AC006484.1-201ENST00000435086 1884 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 HMGB3P20-201ENST00000417997 600 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 AL353678.1-201ENST00000422735 741 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.99□□□□□ -2.09
HSPG2P98160 AC087312.1-201ENST00000471411 480 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 AK5-208ENST00000478255 556 ntTSL 2 BASIC1.99□□□□□ -2.09
HSPG2P98160 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC1.99□□□□□ -2.09
HSPG2P98160 AP000873.5-201ENST00000533906 236 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 AC107016.2-201ENST00000547968 190 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 AL035413.2-201ENST00000604801 525 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 AP000255.1-201ENST00000610276 676 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 CYCSP41-201ENST00000616920 296 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HSPG2P98160 FTX-210ENST00000603037 8347 ntTSL 5 BASIC1.99□□□□□ -2.09
HSPG2P98160 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
HSPG2P98160 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HSPG2P98160 MIR764-201ENST00000390811 85 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC1.98□□□□□ -2.09
HSPG2P98160 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC1.98□□□□□ -2.09
HSPG2P98160 RNA5SP103-201ENST00000459503 118 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
HSPG2P98160 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC1.98□□□□□ -2.09
HSPG2P98160 AP000926.4-201ENST00000527351 454 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 AC087888.1-201ENST00000550884 1254 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 AC009097.3-201ENST00000563557 1018 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HSPG2P98160 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC1.98□□□□□ -2.09
HSPG2P98160 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HSPG2P98160 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HSPG2P98160 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC1.98□□□□□ -2.09
HSPG2P98160 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HSPG2P98160 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HSPG2P98160 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HSPG2P98160 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HSPG2P98160 HSPA8P4-201ENST00000511877 1920 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HSPG2P98160 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC1.98□□□□□ -2.09
HSPG2P98160 TOMM20P4-201ENST00000427861 435 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 AL590103.1-201ENST00000434488 307 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 HLA-N-201ENST00000437516 135 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 RPSAP41-201ENST00000439695 860 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 AC008264.1-201ENST00000447612 367 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 SETP4-201ENST00000455717 868 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 USP9YP2-201ENST00000504503 1000 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 USP9YP1-201ENST00000513521 1002 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 AC026801.2-201ENST00000515352 425 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 RN7SKP244-201ENST00000516513 307 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.98□□□□□ -2.09
HSPG2P98160 AL162574.2-201ENST00000614618 657 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HSPG2P98160 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HSPG2P98160 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC1.98□□□□□ -2.09
HSPG2P98160 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HSPG2P98160 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC1.98□□□□□ -2.09
HSPG2P98160 AL021877.2-201ENST00000624442 10684 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
HSPG2P98160 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC1.98□□□□□ -2.09
HSPG2P98160 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
HSPG2P98160 MIR448-201ENST00000362131 111 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 VN1R8P-201ENST00000407739 893 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 JKAMPP1-201ENST00000413804 919 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 FTLP19-201ENST00000433300 394 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC1.98□□□□□ -2.09
HSPG2P98160 AL357552.1-201ENST00000445254 415 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 RPS20P22-201ENST00000473700 357 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 AC021205.2-201ENST00000480069 347 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC1.98□□□□□ -2.09
HSPG2P98160 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC1.98□□□□□ -2.09
HSPG2P98160 AC027176.1-201ENST00000560204 514 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 AC025811.1-201ENST00000604312 472 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HSPG2P98160 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC1.98□□□□□ -2.09
HSPG2P98160 AL161431.1-201ENST00000618966 4205 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HSPG2P98160 MIR93-201ENST00000385024 80 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 RNA5SP146-201ENST00000410743 123 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 AL645937.1-202ENST00000421799 937 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 AL031736.2-201ENST00000426573 787 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 UBL5P3-201ENST00000475112 231 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 FCF1P3-201ENST00000496394 590 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC1.98□□□□□ -2.09
HSPG2P98160 UBTFL9-201ENST00000534504 1148 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 AC124856.1-201ENST00000600819 896 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 AL162713.1-201ENST00000604480 262 ntBASIC1.98□□□□□ -2.09
HSPG2P98160 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 MIR1289-2-201ENST00000408360 111 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 RNA5SP104-201ENST00000410989 118 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC1.97□□□□□ -2.09
HSPG2P98160 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC1.97□□□□□ -2.09
HSPG2P98160 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.97□□□□□ -2.09
HSPG2P98160 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.97□□□□□ -2.09
HSPG2P98160 ETF1P3-201ENST00000430422 1160 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 RPL12P18-201ENST00000437175 325 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC1.97□□□□□ -2.09
HSPG2P98160 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.97□□□□□ -2.09
HSPG2P98160 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms