Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNU2-17P-201ENST00000410290 190 ntBASIC3.85□□□□□ -1.79
CDH4P55283 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH4P55283 MTND4P24-201ENST00000424002 397 ntBASIC3.85□□□□□ -1.79
CDH4P55283 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.85□□□□□ -1.79
CDH4P55283 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH4P55283 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH4P55283 AL356535.1-201ENST00000440335 398 ntBASIC3.85□□□□□ -1.79
CDH4P55283 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH4P55283 YWHAQP9-201ENST00000445891 512 ntBASIC3.85□□□□□ -1.79
CDH4P55283 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH4P55283 RPL37P6-202ENST00000464216 403 ntBASIC3.85□□□□□ -1.79
CDH4P55283 UBE2CP3-201ENST00000502715 450 ntBASIC3.85□□□□□ -1.79
CDH4P55283 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH4P55283 AC109458.1-201ENST00000508858 316 ntBASIC3.85□□□□□ -1.79
CDH4P55283 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.85□□□□□ -1.79
CDH4P55283 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH4P55283 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH4P55283 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH4P55283 AC006960.3-201ENST00000561845 705 ntBASIC3.85□□□□□ -1.79
CDH4P55283 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH4P55283 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH4P55283 RNU1-30P-201ENST00000606575 163 ntBASIC3.85□□□□□ -1.79
CDH4P55283 AL391497.1-201ENST00000608671 547 ntBASIC3.85□□□□□ -1.79
CDH4P55283 AL121772.2-201ENST00000614331 297 ntBASIC3.85□□□□□ -1.79
CDH4P55283 AC025016.1-201ENST00000616746 682 ntBASIC3.85□□□□□ -1.79
CDH4P55283 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH4P55283 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH4P55283 AC025125.1-201ENST00000624743 1922 ntBASIC3.85□□□□□ -1.79
CDH4P55283 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH4P55283 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH4P55283 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH4P55283 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH4P55283 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
CDH4P55283 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH4P55283 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH4P55283 METTL21EP-201ENST00000298105 713 ntBASIC3.84□□□□□ -1.79
CDH4P55283 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH4P55283 MIR153-1-201ENST00000384914 90 ntBASIC3.84□□□□□ -1.79
CDH4P55283 HMGB1P10-201ENST00000395823 563 ntBASIC3.84□□□□□ -1.79
CDH4P55283 RNU2-6P-201ENST00000411404 190 ntBASIC3.84□□□□□ -1.79
CDH4P55283 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH4P55283 VTA1P1-201ENST00000414044 866 ntBASIC3.84□□□□□ -1.79
CDH4P55283 PRELID3BP11-201ENST00000414230 479 ntBASIC3.84□□□□□ -1.79
CDH4P55283 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH4P55283 AC008065.1-201ENST00000428525 348 ntBASIC3.84□□□□□ -1.79
CDH4P55283 AC018644.1-201ENST00000429934 551 ntBASIC3.84□□□□□ -1.79
CDH4P55283 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH4P55283 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH4P55283 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH4P55283 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH4P55283 ARL5AP2-201ENST00000444698 533 ntBASIC3.84□□□□□ -1.79
CDH4P55283 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH4P55283 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.84□□□□□ -1.79
CDH4P55283 HMGB3P22-202ENST00000451823 572 ntBASIC3.84□□□□□ -1.79
CDH4P55283 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH4P55283 ANP32BP2-201ENST00000454525 545 ntBASIC3.84□□□□□ -1.79
CDH4P55283 SNORD108-201ENST00000459332 71 ntBASIC3.84□□□□□ -1.79
CDH4P55283 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH4P55283 ACTR3P3-201ENST00000480448 893 ntBASIC3.84□□□□□ -1.79
CDH4P55283 AC093663.2-201ENST00000484625 313 ntBASIC3.84□□□□□ -1.79
CDH4P55283 TRBV12-2-201ENST00000489763 344 ntBASIC3.84□□□□□ -1.79
CDH4P55283 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH4P55283 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH4P55283 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH4P55283 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH4P55283 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH4P55283 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH4P55283 AC005972.3-201ENST00000606304 481 ntBASIC3.84□□□□□ -1.79
CDH4P55283 C2orf27A-204ENST00000623058 969 ntBASIC3.84□□□□□ -1.79
CDH4P55283 AC017007.4-201ENST00000503353 1352 ntBASIC3.84□□□□□ -1.79
CDH4P55283 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH4P55283 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CDH4P55283 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDH4P55283 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CDH4P55283 MAPK10-253ENST00000641010 4072 ntBASIC3.84□□□□□ -1.8
CDH4P55283 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.84□□□□□ -1.8
CDH4P55283 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.84□□□□□ -1.8
CDH4P55283 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH4P55283 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CDH4P55283 ZNF90P1-201ENST00000480493 1951 ntBASIC3.83□□□□□ -1.8
CDH4P55283 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH4P55283 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH4P55283 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH4P55283 SOD2P1-201ENST00000396543 562 ntBASIC3.83□□□□□ -1.8
CDH4P55283 TAF9BP2-201ENST00000400856 499 ntBASIC3.83□□□□□ -1.8
CDH4P55283 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH4P55283 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH4P55283 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH4P55283 RPL31P45-201ENST00000419532 356 ntBASIC3.83□□□□□ -1.8
CDH4P55283 AC092832.1-201ENST00000422934 400 ntBASIC3.83□□□□□ -1.8
CDH4P55283 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH4P55283 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH4P55283 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.83□□□□□ -1.8
CDH4P55283 MTND4LP7-201ENST00000431728 294 ntBASIC3.83□□□□□ -1.8
CDH4P55283 AC092809.1-201ENST00000441469 474 ntBASIC3.83□□□□□ -1.8
CDH4P55283 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH4P55283 HMGB1P16-201ENST00000447155 540 ntBASIC3.83□□□□□ -1.8
CDH4P55283 AC092685.1-201ENST00000447960 1243 ntBASIC3.83□□□□□ -1.8
CDH4P55283 AL133547.1-201ENST00000448546 220 ntBASIC3.83□□□□□ -1.8
CDH4P55283 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms