Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.26□□□□□ -1.73
VCPP55072 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.26□□□□□ -1.73
VCPP55072 RPL31P61-201ENST00000496160 376 ntBASIC4.26□□□□□ -1.73
VCPP55072 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.26□□□□□ -1.73
VCPP55072 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.26□□□□□ -1.73
VCPP55072 MTATP6P22-201ENST00000507369 598 ntBASIC4.26□□□□□ -1.73
VCPP55072 FTH1P9-201ENST00000513251 355 ntBASIC4.26□□□□□ -1.73
VCPP55072 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.26□□□□□ -1.73
VCPP55072 IGKV2D-19-201ENST00000523346 262 ntBASIC4.26□□□□□ -1.73
VCPP55072 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.26□□□□□ -1.73
VCPP55072 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.26□□□□□ -1.73
VCPP55072 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.26□□□□□ -1.73
VCPP55072 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.26□□□□□ -1.73
VCPP55072 AC104662.1-201ENST00000604448 511 ntBASIC4.26□□□□□ -1.73
VCPP55072 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.26□□□□□ -1.73
VCPP55072 AC004775.1-201ENST00000607389 753 ntBASIC4.26□□□□□ -1.73
VCPP55072 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VCPP55072 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.26□□□□□ -1.73
VCPP55072 AL773545.4-201ENST00000637262 310 ntBASIC4.26□□□□□ -1.73
VCPP55072 AL513478.4-201ENST00000641636 310 ntBASIC4.26□□□□□ -1.73
VCPP55072 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VCPP55072 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VCPP55072 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.25□□□□□ -1.73
VCPP55072 AL031985.3-201ENST00000565390 2449 ntBASIC4.25□□□□□ -1.73
VCPP55072 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VCPP55072 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.25□□□□□ -1.73
VCPP55072 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VCPP55072 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.25□□□□□ -1.73
VCPP55072 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
VCPP55072 RNU1-87P-201ENST00000363727 170 ntBASIC4.25□□□□□ -1.73
VCPP55072 AL353692.2-201ENST00000407054 335 ntBASIC4.25□□□□□ -1.73
VCPP55072 OR5BE1P-201ENST00000425977 939 ntBASIC4.25□□□□□ -1.73
VCPP55072 AL390879.2-203ENST00000426943 1121 ntBASIC4.25□□□□□ -1.73
VCPP55072 RPL7P4-203ENST00000430239 730 ntBASIC4.25□□□□□ -1.73
VCPP55072 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.25□□□□□ -1.73
VCPP55072 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.25□□□□□ -1.73
VCPP55072 AL590762.3-201ENST00000436372 640 ntBASIC4.25□□□□□ -1.73
VCPP55072 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.25□□□□□ -1.73
VCPP55072 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.25□□□□□ -1.73
VCPP55072 HMGB3P22-202ENST00000451823 572 ntBASIC4.25□□□□□ -1.73
VCPP55072 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.25□□□□□ -1.73
VCPP55072 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VCPP55072 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.25□□□□□ -1.73
VCPP55072 RNU7-143P-201ENST00000516781 65 ntBASIC4.25□□□□□ -1.73
VCPP55072 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.25□□□□□ -1.73
VCPP55072 AC103833.1-201ENST00000517442 172 ntBASIC4.25□□□□□ -1.73
VCPP55072 IGLVIV-53-201ENST00000520107 367 ntBASIC4.25□□□□□ -1.73
VCPP55072 MTND2P7-201ENST00000521337 640 ntBASIC4.25□□□□□ -1.73
VCPP55072 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.25□□□□□ -1.73
VCPP55072 OR8I1P-201ENST00000529291 931 ntBASIC4.25□□□□□ -1.73
VCPP55072 AC138393.1-206ENST00000540997 1886 ntBASIC4.25□□□□□ -1.73
VCPP55072 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.25□□□□□ -1.73
VCPP55072 RPL23AP87-202ENST00000573039 466 ntBASIC4.25□□□□□ -1.73
VCPP55072 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.25□□□□□ -1.73
VCPP55072 AP001180.3-201ENST00000582221 145 ntBASIC4.25□□□□□ -1.73
VCPP55072 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.25□□□□□ -1.73
VCPP55072 AL592436.1-201ENST00000605135 558 ntBASIC4.25□□□□□ -1.73
VCPP55072 AC135178.6-201ENST00000605314 398 ntBASIC4.25□□□□□ -1.73
VCPP55072 AC128687.2-201ENST00000609657 566 ntBASIC4.25□□□□□ -1.73
VCPP55072 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.25□□□□□ -1.73
VCPP55072 AL713922.2-201ENST00000619384 716 ntBASIC4.25□□□□□ -1.73
VCPP55072 AL359715.5-201ENST00000623431 443 ntBASIC4.25□□□□□ -1.73
VCPP55072 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.25□□□□□ -1.73
VCPP55072 OR5BE1P-202ENST00000641168 1176 ntBASIC4.25□□□□□ -1.73
VCPP55072 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.25□□□□□ -1.73
VCPP55072 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.24□□□□□ -1.73
VCPP55072 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
VCPP55072 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VCPP55072 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VCPP55072 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VCPP55072 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.24□□□□□ -1.73
VCPP55072 AC007685.1-201ENST00000329806 452 ntBASIC4.24□□□□□ -1.73
VCPP55072 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.24□□□□□ -1.73
VCPP55072 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VCPP55072 SYF2P2-201ENST00000417620 583 ntBASIC4.24□□□□□ -1.73
VCPP55072 MED6P1-201ENST00000439659 713 ntBASIC4.24□□□□□ -1.73
VCPP55072 AL353093.1-201ENST00000441292 436 ntBASIC4.24□□□□□ -1.73
VCPP55072 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.24□□□□□ -1.73
VCPP55072 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.24□□□□□ -1.73
VCPP55072 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.24□□□□□ -1.73
VCPP55072 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.24□□□□□ -1.73
VCPP55072 FTH1P24-201ENST00000503502 462 ntBASIC4.24□□□□□ -1.73
VCPP55072 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.24□□□□□ -1.73
VCPP55072 AC025768.1-201ENST00000510057 267 ntBASIC4.24□□□□□ -1.73
VCPP55072 AC010285.3-201ENST00000511668 676 ntBASIC4.24□□□□□ -1.73
VCPP55072 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
VCPP55072 MTND1P6-201ENST00000523621 946 ntBASIC4.24□□□□□ -1.73
VCPP55072 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.24□□□□□ -1.73
VCPP55072 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.24□□□□□ -1.73
VCPP55072 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.24□□□□□ -1.73
VCPP55072 AL049870.4-201ENST00000555741 486 ntBASIC4.24□□□□□ -1.73
VCPP55072 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.24□□□□□ -1.73
VCPP55072 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.24□□□□□ -1.73
VCPP55072 AC233266.2-201ENST00000567067 528 ntBASIC4.24□□□□□ -1.73
VCPP55072 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.24□□□□□ -1.73
VCPP55072 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.24□□□□□ -1.73
VCPP55072 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.24□□□□□ -1.73
VCPP55072 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.24□□□□□ -1.73
VCPP55072 AC114878.2-201ENST00000604863 1251 ntBASIC4.24□□□□□ -1.73
VCPP55072 HMGB1P50-201ENST00000605814 607 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms