Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
NR1H2P55055 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NR1H2P55055 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NR1H2P55055 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NR1H2P55055 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NR1H2P55055 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
NR1H2P55055 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NR1H2P55055 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NR1H2P55055 GDI2P1-201ENST00000429312 1336 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NR1H2P55055 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.51□□□□□ -1.69
NR1H2P55055 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.51□□□□□ -1.69
NR1H2P55055 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NR1H2P55055 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.51□□□□□ -1.69
NR1H2P55055 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
NR1H2P55055 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NR1H2P55055 RNVU1-3-201ENST00000364313 161 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NR1H2P55055 SNORA51.6-201ENST00000384151 125 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC119751.3-201ENST00000399720 670 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AL024474.1-201ENST00000404655 591 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.51□□□□□ -1.69
NR1H2P55055 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.51□□□□□ -1.69
NR1H2P55055 RPL7P34-201ENST00000433316 712 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.51□□□□□ -1.69
NR1H2P55055 RPL23AP76-201ENST00000441860 458 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 KNOP1P3-201ENST00000446933 426 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.51□□□□□ -1.69
NR1H2P55055 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.51□□□□□ -1.69
NR1H2P55055 AC092647.2-201ENST00000452998 253 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.51□□□□□ -1.69
NR1H2P55055 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.51□□□□□ -1.69
NR1H2P55055 RPS29P33-201ENST00000456717 146 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 RN7SL738P-201ENST00000470264 297 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC004263.1-201ENST00000479327 332 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC012158.1-204ENST00000483430 465 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 ACTG1P13-201ENST00000486987 1043 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.51□□□□□ -1.69
NR1H2P55055 TMEM248P1-201ENST00000510579 951 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC008837.2-201ENST00000513076 418 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 RN7SKP31-201ENST00000516354 278 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.51□□□□□ -1.69
NR1H2P55055 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.51□□□□□ -1.69
NR1H2P55055 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.51□□□□□ -1.69
NR1H2P55055 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NR1H2P55055 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.51□□□□□ -1.69
NR1H2P55055 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.51□□□□□ -1.69
NR1H2P55055 AC125611.1-201ENST00000549563 229 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 ZNF321P-202ENST00000550843 495 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 HIGD1AP17-201ENST00000554576 276 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.51□□□□□ -1.69
NR1H2P55055 AC145350.1-201ENST00000567426 208 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.51□□□□□ -1.69
NR1H2P55055 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.51□□□□□ -1.69
NR1H2P55055 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.51□□□□□ -1.69
NR1H2P55055 DPRXP5-201ENST00000604662 539 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC004908.3-201ENST00000610248 625 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC107075.1-201ENST00000613695 314 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC121761.2-201ENST00000617300 689 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 RN7SL722P-201ENST00000617780 284 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 RN7SL565P-201ENST00000618246 284 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC091304.6-201ENST00000619761 202 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AL049536.1-201ENST00000625043 744 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
NR1H2P55055 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.51□□□□□ -1.69
NR1H2P55055 INTS6P1-201ENST00000504674 2530 ntBASIC4.51□□□□□ -1.69
NR1H2P55055 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NR1H2P55055 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NR1H2P55055 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NR1H2P55055 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NR1H2P55055 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
NR1H2P55055 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NR1H2P55055 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
NR1H2P55055 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.5□□□□□ -1.69
NR1H2P55055 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NR1H2P55055 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.5□□□□□ -1.69
NR1H2P55055 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.5□□□□□ -1.69
NR1H2P55055 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NR1H2P55055 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
NR1H2P55055 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NR1H2P55055 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NR1H2P55055 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NR1H2P55055 RNU6-1214P-201ENST00000363650 109 ntBASIC4.5□□□□□ -1.69
NR1H2P55055 RN7SKP113-201ENST00000363891 295 ntBASIC4.5□□□□□ -1.69
NR1H2P55055 RHOT1P2-201ENST00000366423 333 ntBASIC4.5□□□□□ -1.69
NR1H2P55055 RNU6-83P-201ENST00000384568 112 ntBASIC4.5□□□□□ -1.69
NR1H2P55055 MT-TC-201ENST00000387405 66 ntBASIC4.5□□□□□ -1.69
NR1H2P55055 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.5□□□□□ -1.69
NR1H2P55055 RNA5SP80-201ENST00000410475 111 ntBASIC4.5□□□□□ -1.69
NR1H2P55055 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.5□□□□□ -1.69
NR1H2P55055 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.5□□□□□ -1.69
NR1H2P55055 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.5□□□□□ -1.69
NR1H2P55055 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.5□□□□□ -1.69
NR1H2P55055 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.5□□□□□ -1.69
NR1H2P55055 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.5□□□□□ -1.69
NR1H2P55055 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.5□□□□□ -1.69
NR1H2P55055 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.5□□□□□ -1.69
NR1H2P55055 COX7BP2-201ENST00000437976 242 ntBASIC4.5□□□□□ -1.69
NR1H2P55055 AL353748.1-201ENST00000440753 474 ntBASIC4.5□□□□□ -1.69
NR1H2P55055 MTND2P20-201ENST00000440805 661 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms