Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXD12P35452 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXD12P35452 AC069545.1-201ENST00000605671 358 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.8□□□□□ -1.64
HOXD12P35452 AC005962.2-201ENST00000611427 652 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 MLECP1-201ENST00000615893 709 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 AC121761.2-201ENST00000617300 689 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXD12P35452 AC010608.2-201ENST00000624830 470 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD12P35452 MIR4278-201ENST00000636094 69 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD12P35452 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD12P35452 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
HOXD12P35452 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HOXD12P35452 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD12P35452 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
HOXD12P35452 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD12P35452 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HOXD12P35452 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXD12P35452 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD12P35452 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
HOXD12P35452 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HOXD12P35452 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD12P35452 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXD12P35452 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD12P35452 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXD12P35452 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD12P35452 AC025263.3-201ENST00000622965 1396 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD12P35452 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD12P35452 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXD12P35452 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD12P35452 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HOXD12P35452 RNA5SP447-201ENST00000363749 119 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 Y_RNA.318-201ENST00000365131 97 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD12P35452 RNU6-1293P-201ENST00000384077 107 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 MIR124-3-201ENST00000384866 87 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 AL078604.1-201ENST00000404609 466 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXD12P35452 RNU4-25P-201ENST00000410569 230 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 NRBF2P2-201ENST00000413087 861 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD12P35452 RPS15AP40-201ENST00000419621 391 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXD12P35452 AL139421.1-201ENST00000423010 169 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD12P35452 DPRXP1-201ENST00000426312 460 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 MTCO1P54-201ENST00000430139 712 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXD12P35452 AL354941.1-201ENST00000438600 464 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 USP9YP22-201ENST00000438971 294 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 ARL4AP3-201ENST00000441452 574 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD12P35452 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD12P35452 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXD12P35452 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 FGF7P3-201ENST00000454645 303 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 AL109741.2-201ENST00000455561 343 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXD12P35452 AC108734.3-201ENST00000481241 1165 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 LINC00888-204ENST00000487386 421 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD12P35452 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXD12P35452 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD12P35452 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD12P35452 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD12P35452 AC015795.1-201ENST00000513669 327 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 RN7SKP234-201ENST00000517173 224 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD12P35452 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXD12P35452 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXD12P35452 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
HOXD12P35452 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD12P35452 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD12P35452 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD12P35452 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD12P35452 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD12P35452 AC079171.1-201ENST00000568788 914 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 AC146944.4-201ENST00000602697 718 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 LLPHP1-201ENST00000603571 367 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 AC103792.1-201ENST00000603591 919 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 AC106791.2-201ENST00000604680 391 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD12P35452 AL451074.6-201ENST00000608512 729 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 RNU6-156P-201ENST00000621869 107 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXD12P35452 MIR4496-201ENST00000635896 61 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD12P35452 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD12P35452 AP000776.1-201ENST00000530032 1663 ntBASIC4.79□□□□□ -1.64
HOXD12P35452 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD12P35452 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD12P35452 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD12P35452 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXD12P35452 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXD12P35452 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD12P35452 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD12P35452 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms