Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.61□□□□□ -1.51
CNGA1P29973 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.61□□□□□ -1.51
CNGA1P29973 MIR6830-201ENST00000636015 70 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 AC139713.2-214ENST00000642059 1811 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.61□□□□□ -1.51
CNGA1P29973 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.61□□□□□ -1.51
CNGA1P29973 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNGA1P29973 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CNGA1P29973 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNGA1P29973 ADAM5-202ENST00000399789 1942 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNGA1P29973 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CNGA1P29973 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNGA1P29973 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNGA1P29973 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.6□□□□□ -1.51
CNGA1P29973 ZNF652P1-201ENST00000442420 1309 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNGA1P29973 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CNGA1P29973 RNU6-1243P-201ENST00000364028 107 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 RNA5SP479-201ENST00000364858 117 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 AC004690.1-201ENST00000418216 328 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.6□□□□□ -1.51
CNGA1P29973 AL358176.3-201ENST00000420757 454 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 BX119904.4-201ENST00000424402 301 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.6□□□□□ -1.51
CNGA1P29973 VN1R10P-201ENST00000447106 875 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.6□□□□□ -1.51
CNGA1P29973 RPL39P6-201ENST00000448289 150 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNGA1P29973 HMGB3P21-201ENST00000452483 547 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 MTCO3P16-201ENST00000454456 754 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 AC092754.2-201ENST00000463506 460 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 AC092045.1-201ENST00000495716 1231 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.6□□□□□ -1.51
CNGA1P29973 AC006499.2-201ENST00000513470 337 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 ENPP7P9-201ENST00000514456 627 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.6□□□□□ -1.51
CNGA1P29973 AC084824.1-201ENST00000550917 1005 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 CYCSP2-201ENST00000558168 301 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.6□□□□□ -1.51
CNGA1P29973 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.6□□□□□ -1.51
CNGA1P29973 TVP23CP2-201ENST00000571473 623 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 PRPF19P1-201ENST00000584766 898 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.6□□□□□ -1.51
CNGA1P29973 AC078899.5-201ENST00000612475 178 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 AC243773.3-201ENST00000613270 256 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CNGA1P29973 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.6□□□□□ -1.51
CNGA1P29973 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.6□□□□□ -1.51
CNGA1P29973 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
CNGA1P29973 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.6□□□□□ -1.51
CNGA1P29973 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNGA1P29973 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
CNGA1P29973 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNGA1P29973 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.6□□□□□ -1.51
CNGA1P29973 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNGA1P29973 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CNGA1P29973 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNGA1P29973 AL079343.1-201ENST00000572358 1771 ntBASIC5.6□□□□□ -1.51
CNGA1P29973 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNGA1P29973 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.6□□□□□ -1.51
CNGA1P29973 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNGA1P29973 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.59□□□□□ -1.51
CNGA1P29973 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CNGA1P29973 AC093535.2-201ENST00000624769 2326 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNGA1P29973 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNGA1P29973 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNGA1P29973 RN7SKP227-201ENST00000364445 330 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNGA1P29973 AL023807.1-201ENST00000407932 359 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 RPS15AP38-201ENST00000413110 372 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 BX510359.2-201ENST00000417920 305 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 TMBIM7P-201ENST00000418074 855 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 AL953862.1-201ENST00000423016 168 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.59□□□□□ -1.51
CNGA1P29973 VN1R108P-201ENST00000431580 830 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 RPL34P6-201ENST00000432390 345 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.59□□□□□ -1.51
CNGA1P29973 MTCYBP39-201ENST00000437562 491 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.59□□□□□ -1.51
CNGA1P29973 PTMAP3-201ENST00000447474 330 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.59□□□□□ -1.51
CNGA1P29973 CEACAMP6-201ENST00000452007 574 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 MTND2P28-201ENST00000457540 1044 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 RPL23AP56-201ENST00000460778 453 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.59□□□□□ -1.51
CNGA1P29973 SETP11-201ENST00000473027 690 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 RPS6P4-201ENST00000494693 758 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.59□□□□□ -1.51
CNGA1P29973 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.59□□□□□ -1.51
CNGA1P29973 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.59□□□□□ -1.51
CNGA1P29973 AC117532.1-201ENST00000514638 323 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 AC104057.1-201ENST00000515547 497 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.59□□□□□ -1.51
CNGA1P29973 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.59□□□□□ -1.51
CNGA1P29973 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.59□□□□□ -1.51
CNGA1P29973 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.59□□□□□ -1.51
CNGA1P29973 LSM6P2-201ENST00000552208 177 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 AC040958.1-201ENST00000561102 201 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms