Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPN4P29074 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPN4P29074 AC105233.3-201ENST00000531125 744 ntBASIC4.02□□□□□ -1.77
PTPN4P29074 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.02□□□□□ -1.77
PTPN4P29074 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPN4P29074 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPN4P29074 ATP5F1P7-201ENST00000567330 760 ntBASIC4.02□□□□□ -1.77
PTPN4P29074 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPN4P29074 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPN4P29074 AC099676.1-201ENST00000608886 657 ntBASIC4.02□□□□□ -1.77
PTPN4P29074 AC092574.1-201ENST00000609771 420 ntBASIC4.02□□□□□ -1.77
PTPN4P29074 MIR6867-201ENST00000610636 67 ntBASIC4.02□□□□□ -1.77
PTPN4P29074 AC084824.5-201ENST00000612009 413 ntBASIC4.02□□□□□ -1.77
PTPN4P29074 AC022079.2-201ENST00000619739 566 ntBASIC4.02□□□□□ -1.77
PTPN4P29074 AL445363.3-201ENST00000623080 671 ntBASIC4.02□□□□□ -1.77
PTPN4P29074 U6.107-201ENST00000637108 79 ntBASIC4.02□□□□□ -1.77
PTPN4P29074 AC008013.2-202ENST00000637965 364 ntBASIC4.02□□□□□ -1.77
PTPN4P29074 AC132825.7-201ENST00000638744 335 ntBASIC4.02□□□□□ -1.77
PTPN4P29074 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPN4P29074 AC095050.2-201ENST00000510748 1458 ntBASIC4.02□□□□□ -1.77
PTPN4P29074 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN4P29074 ASNSP1-204ENST00000641977 1664 ntBASIC4.02□□□□□ -1.77
PTPN4P29074 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN4P29074 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN4P29074 XPOTP1-201ENST00000443317 2398 ntBASIC4.02□□□□□ -1.77
PTPN4P29074 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPN4P29074 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN4P29074 DCAF13P1-201ENST00000495256 1330 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN4P29074 ENSAP3-201ENST00000312710 333 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 SNORD56.4-201ENST00000363883 71 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 RNA5SP283-201ENST00000365604 119 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN4P29074 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN4P29074 MIR3074-201ENST00000384885 81 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PTPN4P29074 RNU6-796P-201ENST00000391086 107 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 RPL32P23-201ENST00000397237 405 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AP002784.2-201ENST00000397300 549 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPN4P29074 RNU2-6P-201ENST00000411404 190 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AL158825.1-201ENST00000414735 521 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 NUP35P2-201ENST00000416748 943 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPN4P29074 RPL36AP36-201ENST00000418616 301 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPN4P29074 AC093698.1-201ENST00000423843 571 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPN4P29074 MTCO1P43-201ENST00000431831 488 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN4P29074 RPL5P32-201ENST00000454085 879 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 RPL21P129-201ENST00000491732 478 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AC106872.2-201ENST00000494303 480 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AC092045.1-201ENST00000495716 1231 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AL035404.1-201ENST00000497982 568 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 SLC25A15P5-201ENST00000508033 253 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AC008565.1-201ENST00000509046 885 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPN4P29074 AC026726.1-201ENST00000512859 601 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPN4P29074 Vault.1-201ENST00000516474 102 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.01□□□□□ -1.77
PTPN4P29074 HMGB1P1-201ENST00000522557 636 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 MED28P5-201ENST00000528254 438 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN4P29074 AP003717.3-201ENST00000544832 1180 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPN4P29074 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPN4P29074 AC034105.4-201ENST00000568304 277 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AC022916.3-201ENST00000592961 742 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 RNU4-89P-201ENST00000607443 133 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AC112503.1-201ENST00000608436 391 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AC245100.7-201ENST00000609678 442 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN4P29074 RMST_10.1-201ENST00000616309 154 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 AC010608.2-201ENST00000624830 470 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PTPN4P29074 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN4P29074 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPN4P29074 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PTPN4P29074 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN4P29074 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN4P29074 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN4P29074 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN4P29074 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN4P29074 UBE3AP2-201ENST00000429033 2259 ntBASIC4.01□□□□□ -1.77
PTPN4P29074 MFSD8-213ENST00000641134 1327 ntBASIC4□□□□□ -1.77
PTPN4P29074 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PTPN4P29074 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PTPN4P29074 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PTPN4P29074 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PTPN4P29074 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PTPN4P29074 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4□□□□□ -1.77
PTPN4P29074 ENSAP1-201ENST00000392855 326 ntBASIC4□□□□□ -1.77
PTPN4P29074 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4□□□□□ -1.77
PTPN4P29074 ATP5F1P6-201ENST00000402768 767 ntBASIC4□□□□□ -1.77
PTPN4P29074 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4□□□□□ -1.77
PTPN4P29074 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTPN4P29074 RPL37P1-201ENST00000432310 284 ntBASIC4□□□□□ -1.77
PTPN4P29074 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms