Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 AC041039.1-201ENST00000485656 536 ntBASIC4.19□□□□□ -1.74
MSH3P20585 AC091167.1-201ENST00000492017 396 ntBASIC4.19□□□□□ -1.74
MSH3P20585 AL035404.1-201ENST00000497982 568 ntBASIC4.19□□□□□ -1.74
MSH3P20585 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MSH3P20585 AC017037.1-201ENST00000508460 471 ntBASIC4.19□□□□□ -1.74
MSH3P20585 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.19□□□□□ -1.74
MSH3P20585 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.19□□□□□ -1.74
MSH3P20585 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.19□□□□□ -1.74
MSH3P20585 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.19□□□□□ -1.74
MSH3P20585 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.19□□□□□ -1.74
MSH3P20585 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.19□□□□□ -1.74
MSH3P20585 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.19□□□□□ -1.74
MSH3P20585 AC015688.2-201ENST00000584523 262 ntBASIC4.19□□□□□ -1.74
MSH3P20585 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.19□□□□□ -1.74
MSH3P20585 MIR3138-201ENST00000585238 82 ntBASIC4.19□□□□□ -1.74
MSH3P20585 AC011477.5-201ENST00000586571 259 ntBASIC4.19□□□□□ -1.74
MSH3P20585 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.19□□□□□ -1.74
MSH3P20585 AL139395.1-201ENST00000603662 160 ntBASIC4.19□□□□□ -1.74
MSH3P20585 AC107952.2-201ENST00000606048 486 ntBASIC4.19□□□□□ -1.74
MSH3P20585 AC026368.1-201ENST00000614934 690 ntBASIC4.19□□□□□ -1.74
MSH3P20585 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.19□□□□□ -1.74
MSH3P20585 AC006338.2-201ENST00000616864 791 ntBASIC4.19□□□□□ -1.74
MSH3P20585 OR1S1-201ENST00000624470 978 ntBASIC4.19□□□□□ -1.74
MSH3P20585 AL356121.2-201ENST00000624715 780 ntBASIC4.19□□□□□ -1.74
MSH3P20585 MIR6715B-201ENST00000637172 77 ntBASIC4.19□□□□□ -1.74
MSH3P20585 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
MSH3P20585 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.19□□□□□ -1.74
MSH3P20585 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
MSH3P20585 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.19□□□□□ -1.74
MSH3P20585 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
MSH3P20585 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MSH3P20585 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.19□□□□□ -1.74
MSH3P20585 AC022893.2-201ENST00000564832 3296 ntBASIC4.19□□□□□ -1.74
MSH3P20585 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MSH3P20585 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MSH3P20585 Z73965.1-201ENST00000623412 2297 ntBASIC4.18□□□□□ -1.74
MSH3P20585 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
MSH3P20585 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MSH3P20585 AC126755.2-208ENST00000327792 462 ntBASIC4.18□□□□□ -1.74
MSH3P20585 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
MSH3P20585 AC138969.1-213ENST00000331436 462 ntBASIC4.18□□□□□ -1.74
MSH3P20585 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
MSH3P20585 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.18□□□□□ -1.74
MSH3P20585 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.18□□□□□ -1.74
MSH3P20585 RN7SKP182-201ENST00000410772 298 ntBASIC4.18□□□□□ -1.74
MSH3P20585 RPS24P7-201ENST00000416921 246 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AL356320.2-201ENST00000417263 507 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.18□□□□□ -1.74
MSH3P20585 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.18□□□□□ -1.74
MSH3P20585 COX6CP17-201ENST00000421389 185 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.18□□□□□ -1.74
MSH3P20585 RPS24P8-201ENST00000431490 402 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.18□□□□□ -1.74
MSH3P20585 MTCO2P20-201ENST00000437339 673 ntBASIC4.18□□□□□ -1.74
MSH3P20585 NUTF2P3-201ENST00000448540 384 ntBASIC4.18□□□□□ -1.74
MSH3P20585 NPM1P13-201ENST00000452663 865 ntBASIC4.18□□□□□ -1.74
MSH3P20585 IFNWP4-201ENST00000453148 294 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC096992.1-201ENST00000459808 709 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC005410.1-202ENST00000460347 485 ntBASIC4.18□□□□□ -1.74
MSH3P20585 RPS23P7-201ENST00000466210 444 ntBASIC4.18□□□□□ -1.74
MSH3P20585 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.18□□□□□ -1.74
MSH3P20585 RN7SL585P-201ENST00000470538 280 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC091959.2-201ENST00000477363 321 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC069528.1-202ENST00000482888 637 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC026979.1-201ENST00000492525 396 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC092593.2-201ENST00000513866 913 ntBASIC4.18□□□□□ -1.74
MSH3P20585 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MSH3P20585 MRPS36P3-201ENST00000519284 130 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC090281.1-201ENST00000523019 276 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC009712.1-201ENST00000564938 316 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.18□□□□□ -1.74
MSH3P20585 MIR3939-201ENST00000582614 106 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC110743.1-201ENST00000584870 478 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MSH3P20585 NIFKP6-201ENST00000598115 845 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AL020997.3-201ENST00000602843 359 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC025811.1-201ENST00000604312 472 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC025588.2-201ENST00000604851 466 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AL583856.2-201ENST00000606298 543 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.18□□□□□ -1.74
MSH3P20585 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MSH3P20585 RMST_9.1-201ENST00000619945 193 ntBASIC4.18□□□□□ -1.74
MSH3P20585 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MSH3P20585 AC109454.4-201ENST00000623411 649 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC116563.2-201ENST00000624751 535 ntBASIC4.18□□□□□ -1.74
MSH3P20585 MIR6830-201ENST00000636015 70 ntBASIC4.18□□□□□ -1.74
MSH3P20585 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
MSH3P20585 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
MSH3P20585 LINC02211-204ENST00000642024 1070 ntBASIC4.18□□□□□ -1.74
MSH3P20585 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MSH3P20585 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
MSH3P20585 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MSH3P20585 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.18□□□□□ -1.74
MSH3P20585 MTND4P31-201ENST00000425607 1343 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC104446.1-201ENST00000613728 1321 ntBASIC4.18□□□□□ -1.74
MSH3P20585 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MSH3P20585 AC138393.1-206ENST00000540997 1886 ntBASIC4.18□□□□□ -1.74
MSH3P20585 AC006042.3-201ENST00000454684 1469 ntBASIC4.18□□□□□ -1.74
MSH3P20585 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.18□□□□□ -1.74
MSH3P20585 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms