Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRNA1P02708 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.15□□□□□ -1.75
CHRNA1P02708 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA1P02708 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRNA1P02708 RN7SKP18-201ENST00000516005 275 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 SNORA31.13-201ENST00000516624 135 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 AC087272.1-201ENST00000523624 533 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 GNRHR2P1-201ENST00000555315 631 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA1P02708 AL731537.2-201ENST00000561565 951 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRNA1P02708 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRNA1P02708 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA1P02708 AC040174.2-201ENST00000602701 465 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA1P02708 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRNA1P02708 AC115621.1-201ENST00000604653 858 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 SNORA62.6-201ENST00000606322 83 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 U3.45-201ENST00000607547 219 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRNA1P02708 AP000255.1-201ENST00000610276 676 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 AC096577.2-201ENST00000611455 153 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 AL591424.2-201ENST00000617023 128 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 U6.48-201ENST00000618523 106 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 AC079684.1-201ENST00000621405 437 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 AC090617.9-201ENST00000623751 147 ntBASIC4.15□□□□□ -1.75
CHRNA1P02708 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CHRNA1P02708 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA1P02708 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA1P02708 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA1P02708 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.15□□□□□ -1.75
CHRNA1P02708 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA1P02708 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CHRNA1P02708 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CHRNA1P02708 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.14□□□□□ -1.75
CHRNA1P02708 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA1P02708 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA1P02708 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA1P02708 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA1P02708 RNU2-65P-201ENST00000410162 185 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 AC010385.1-201ENST00000412374 256 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.14□□□□□ -1.75
CHRNA1P02708 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.14□□□□□ -1.75
CHRNA1P02708 RPL30P3-201ENST00000424262 333 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.14□□□□□ -1.75
CHRNA1P02708 AP000907.1-201ENST00000428428 510 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.14□□□□□ -1.75
CHRNA1P02708 PTP4A1P3-201ENST00000433661 420 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 SNORA71B-202ENST00000439232 272 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 AC097499.1-201ENST00000444277 208 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 EXTL2P1-201ENST00000446218 416 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 RPL23AP23-201ENST00000452590 471 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 AC089999.1-201ENST00000460336 374 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.14□□□□□ -1.75
CHRNA1P02708 RPS26P15-201ENST00000488067 348 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 AC005726.1-201ENST00000494679 427 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 RAC1P2-201ENST00000511164 579 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.14□□□□□ -1.75
CHRNA1P02708 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.14□□□□□ -1.75
CHRNA1P02708 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.14□□□□□ -1.75
CHRNA1P02708 AC091515.1-201ENST00000548110 679 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 AC233266.2-201ENST00000567067 528 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.14□□□□□ -1.75
CHRNA1P02708 OR4H6P-202ENST00000603819 340 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 AC092354.2-201ENST00000607786 514 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA1P02708 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.14□□□□□ -1.75
CHRNA1P02708 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.14□□□□□ -1.75
CHRNA1P02708 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA1P02708 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA1P02708 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA1P02708 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.14□□□□□ -1.75
CHRNA1P02708 EXOC5P1-201ENST00000510543 1969 ntBASIC4.14□□□□□ -1.75
CHRNA1P02708 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.14□□□□□ -1.75
CHRNA1P02708 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CHRNA1P02708 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA1P02708 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA1P02708 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CHRNA1P02708 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA1P02708 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA1P02708 MFSD8-236ENST00000641509 4050 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.13□□□□□ -1.75
CHRNA1P02708 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
CHRNA1P02708 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA1P02708 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA1P02708 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA1P02708 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA1P02708 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.13□□□□□ -1.75
CHRNA1P02708 PTMAP5-201ENST00000393073 333 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 RPL17P50-201ENST00000396131 546 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 ATP5A1P2-201ENST00000412323 255 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.13□□□□□ -1.75
CHRNA1P02708 AC093698.1-201ENST00000423843 571 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.13□□□□□ -1.75
CHRNA1P02708 AL159987.2-201ENST00000432754 307 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 RPL7P28-201ENST00000437739 740 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 SETD6P1-201ENST00000444575 317 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.13□□□□□ -1.75
CHRNA1P02708 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.13□□□□□ -1.75
CHRNA1P02708 AC087385.1-201ENST00000475062 312 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms