Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN9O95484 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CLDN9O95484 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN9O95484 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CLDN9O95484 MTND4P21-201ENST00000453886 1357 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CLDN9O95484 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CLDN9O95484 SPRR2C-201ENST00000290702 219 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 AL589826.1-201ENST00000340697 249 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CLDN9O95484 RNU1-13P-201ENST00000384499 162 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 RNU6-1005P-201ENST00000384519 107 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 RPL17P50-201ENST00000396131 546 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 UBE2V1P11-201ENST00000411559 285 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN9O95484 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN9O95484 KCTD10P1-201ENST00000434203 625 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN9O95484 PPIAP17-201ENST00000438507 471 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 SNORA71B-202ENST00000439232 272 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 HMGB1P48-201ENST00000446155 598 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 AC068135.1-201ENST00000446164 246 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN9O95484 RPS20P21-201ENST00000466859 343 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CLDN9O95484 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN9O95484 RAC1P2-201ENST00000511164 579 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 RPL7L1P13-201ENST00000511702 739 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 RN7SKP234-201ENST00000517173 224 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN9O95484 AC022695.1-201ENST00000522089 237 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.67□□□□□ -1.82
CLDN9O95484 AC010306.1-201ENST00000523223 1117 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 C1DP5-201ENST00000525775 383 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.67□□□□□ -1.82
CLDN9O95484 MIR4644-201ENST00000579929 84 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 VN1R79P-201ENST00000593540 513 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 AL354696.1-201ENST00000614652 497 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN9O95484 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN9O95484 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CLDN9O95484 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN9O95484 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN9O95484 MTND5P11-201ENST00000511037 1812 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN9O95484 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN9O95484 MTCO1P14-201ENST00000441695 1559 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN9O95484 AC027287.1-201ENST00000553115 1453 ntBASIC3.67□□□□□ -1.82
CLDN9O95484 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN9O95484 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN9O95484 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN9O95484 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
CLDN9O95484 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN9O95484 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN9O95484 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN9O95484 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN9O95484 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN9O95484 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN9O95484 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN9O95484 RNU6-213P-201ENST00000384051 104 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CLDN9O95484 NUP35P2-201ENST00000416748 943 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.66□□□□□ -1.82
CLDN9O95484 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.66□□□□□ -1.82
CLDN9O95484 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN9O95484 RPL21P109-201ENST00000422213 475 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 OR8F1P-201ENST00000425243 930 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 AL117339.2-201ENST00000430475 180 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 BMS1P19-201ENST00000433925 393 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN9O95484 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN9O95484 AC006480.1-201ENST00000449887 378 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 AC104689.1-201ENST00000473356 768 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 RPL21P103-201ENST00000479921 488 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN9O95484 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN9O95484 TPT1P3-201ENST00000492841 512 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CLDN9O95484 AC108064.1-201ENST00000513791 460 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN9O95484 RNA5SP208-201ENST00000516156 78 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 RN7SKP83-201ENST00000516512 178 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN9O95484 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN9O95484 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN9O95484 AC092851.1-201ENST00000535964 478 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN9O95484 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN9O95484 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN9O95484 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN9O95484 AL606490.9-201ENST00000603331 271 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 AC110741.2-201ENST00000605278 268 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 AL109618.2-201ENST00000605527 211 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 AP001033.2-201ENST00000609701 1003 ntBASIC3.66□□□□□ -1.82
CLDN9O95484 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN9O95484 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN9O95484 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN9O95484 DCAF13P1-201ENST00000495256 1330 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms