Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RFXAPO00287 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFXAPO00287 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.53□□□□□ -1.52
RFXAPO00287 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RFXAPO00287 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RFXAPO00287 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RFXAPO00287 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.52□□□□□ -1.53
RFXAPO00287 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.52□□□□□ -1.53
RFXAPO00287 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RFXAPO00287 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
RFXAPO00287 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RFXAPO00287 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RFXAPO00287 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RFXAPO00287 RNA5SP90-201ENST00000364801 99 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 RNU1-59P-201ENST00000364829 162 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RFXAPO00287 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RFXAPO00287 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RFXAPO00287 AC109780.2-201ENST00000413467 845 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.52□□□□□ -1.53
RFXAPO00287 AL353729.1-201ENST00000425044 720 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 AL513185.2-201ENST00000425543 193 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.52□□□□□ -1.53
RFXAPO00287 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.52□□□□□ -1.53
RFXAPO00287 RPS29P10-201ENST00000439197 166 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 USP9YP12-201ENST00000450481 570 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 NUTF2P7-201ENST00000453086 375 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 RAD23BP3-201ENST00000454157 1152 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.52□□□□□ -1.53
RFXAPO00287 AC021660.1-201ENST00000465006 554 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 GAPDHP39-201ENST00000481866 979 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 RPL39P36-201ENST00000490784 156 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 KLRA1P-201ENST00000503499 986 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.52□□□□□ -1.53
RFXAPO00287 SNX5P1-201ENST00000505757 1041 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 FGF7P4-201ENST00000509595 295 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 COX6B1P5-201ENST00000509843 249 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.52□□□□□ -1.53
RFXAPO00287 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.52□□□□□ -1.53
RFXAPO00287 snoU109.5-201ENST00000516231 132 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 RN7SKP21-201ENST00000516503 220 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.52□□□□□ -1.53
RFXAPO00287 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.52□□□□□ -1.53
RFXAPO00287 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.52□□□□□ -1.53
RFXAPO00287 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.52□□□□□ -1.53
RFXAPO00287 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.52□□□□□ -1.53
RFXAPO00287 RN7SL356P-201ENST00000582228 248 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 AP001004.1-201ENST00000582468 324 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 KPNA2P3-201ENST00000584190 848 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 BNIP3P4-201ENST00000604946 565 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 AC106900.2-201ENST00000604994 317 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 AC010200.2-201ENST00000605098 235 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 AP001521.2-201ENST00000608772 546 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 U1.25-201ENST00000614085 162 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.52□□□□□ -1.53
RFXAPO00287 U1.34-201ENST00000618578 162 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 U1.31-201ENST00000620022 160 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 AC138305.3-201ENST00000624988 240 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.52□□□□□ -1.53
RFXAPO00287 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.52□□□□□ -1.53
RFXAPO00287 MIR1321-201ENST00000637766 79 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RFXAPO00287 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RFXAPO00287 AC117529.2-201ENST00000512159 2068 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.52□□□□□ -1.53
RFXAPO00287 AC239868.2-201ENST00000564237 4527 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RFXAPO00287 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RFXAPO00287 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RFXAPO00287 AC012078.1-201ENST00000405035 1646 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 CASC19-260ENST00000641828 2001 ntBASIC5.52□□□□□ -1.53
RFXAPO00287 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFXAPO00287 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFXAPO00287 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
RFXAPO00287 OR4F13P-202ENST00000560066 2054 ntBASIC5.51□□□□□ -1.53
RFXAPO00287 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
RFXAPO00287 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFXAPO00287 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RFXAPO00287 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RFXAPO00287 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.51□□□□□ -1.53
RFXAPO00287 Y_RNA.97-201ENST00000363094 102 ntBASIC5.51□□□□□ -1.53
RFXAPO00287 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RFXAPO00287 GNG5P2-201ENST00000372054 207 ntBASIC5.51□□□□□ -1.53
RFXAPO00287 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFXAPO00287 DBIP1-201ENST00000401435 260 ntBASIC5.51□□□□□ -1.53
RFXAPO00287 Z97832.1-201ENST00000402490 328 ntBASIC5.51□□□□□ -1.53
RFXAPO00287 RNA5SP113-201ENST00000410486 84 ntBASIC5.51□□□□□ -1.53
RFXAPO00287 JKAMPP1-201ENST00000413804 919 ntBASIC5.51□□□□□ -1.53
RFXAPO00287 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.51□□□□□ -1.53
RFXAPO00287 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
RFXAPO00287 AC004975.1-201ENST00000428733 208 ntBASIC5.51□□□□□ -1.53
RFXAPO00287 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.51□□□□□ -1.53
RFXAPO00287 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.51□□□□□ -1.53
RFXAPO00287 UBE2FP3-201ENST00000436366 524 ntBASIC5.51□□□□□ -1.53
RFXAPO00287 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.51□□□□□ -1.53
RFXAPO00287 AC002542.1-201ENST00000440683 193 ntBASIC5.51□□□□□ -1.53
RFXAPO00287 KNOP1P3-201ENST00000446933 426 ntBASIC5.51□□□□□ -1.53
RFXAPO00287 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.51□□□□□ -1.53
RFXAPO00287 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms