Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RPL30P11-201ENST00000495304 339 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 HMGB1P21-201ENST00000502313 581 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 UBE2CP3-201ENST00000502715 450 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 OR5H4P-201ENST00000510851 923 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.86□□□□□ -1.79
PDLIM1O00151 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.86□□□□□ -1.79
PDLIM1O00151 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC083923.1-201ENST00000523708 376 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.86□□□□□ -1.79
PDLIM1O00151 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.86□□□□□ -1.79
PDLIM1O00151 GNRHR2P1-201ENST00000555315 631 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AL121576.1-201ENST00000556055 276 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 ATP5F1P7-201ENST00000567330 760 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 MIR3908-201ENST00000579798 126 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.86□□□□□ -1.79
PDLIM1O00151 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.86□□□□□ -1.79
PDLIM1O00151 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.86□□□□□ -1.79
PDLIM1O00151 AC104662.1-201ENST00000604448 511 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC113403.1-201ENST00000604910 193 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC112503.2-201ENST00000609005 552 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC096586.1-201ENST00000610267 561 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC099669.2-201ENST00000616549 437 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 FRG1HP-204ENST00000617940 757 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC016717.3-201ENST00000624730 554 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.86□□□□□ -1.79
PDLIM1O00151 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PDLIM1O00151 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PDLIM1O00151 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.86□□□□□ -1.79
PDLIM1O00151 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDLIM1O00151 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PDLIM1O00151 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PDLIM1O00151 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.85□□□□□ -1.79
PDLIM1O00151 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.85□□□□□ -1.79
PDLIM1O00151 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM1O00151 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PDLIM1O00151 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM1O00151 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
PDLIM1O00151 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PDLIM1O00151 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM1O00151 AF127577.6-201ENST00000623352 2191 ntBASIC3.85□□□□□ -1.79
PDLIM1O00151 MIR331-201ENST00000362302 94 ntBASIC3.85□□□□□ -1.79
PDLIM1O00151 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM1O00151 RPS12P23-201ENST00000419579 400 ntBASIC3.85□□□□□ -1.79
PDLIM1O00151 AC092809.1-201ENST00000441469 474 ntBASIC3.85□□□□□ -1.79
PDLIM1O00151 RPS29P31-201ENST00000446147 164 ntBASIC3.85□□□□□ -1.79
PDLIM1O00151 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.85□□□□□ -1.79
PDLIM1O00151 TPT1P3-201ENST00000492841 512 ntBASIC3.85□□□□□ -1.79
PDLIM1O00151 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.85□□□□□ -1.79
PDLIM1O00151 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM1O00151 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.85□□□□□ -1.79
PDLIM1O00151 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM1O00151 TRAV8-5-201ENST00000537369 341 ntBASIC3.85□□□□□ -1.79
PDLIM1O00151 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.85□□□□□ -1.79
PDLIM1O00151 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.85□□□□□ -1.79
PDLIM1O00151 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PDLIM1O00151 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM1O00151 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM1O00151 AC124283.4-201ENST00000581815 456 ntBASIC3.85□□□□□ -1.79
PDLIM1O00151 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.85□□□□□ -1.79
PDLIM1O00151 AC010680.4-201ENST00000605334 543 ntBASIC3.85□□□□□ -1.79
PDLIM1O00151 AP002371.2-201ENST00000624450 503 ntBASIC3.85□□□□□ -1.79
PDLIM1O00151 SNORA50A-202ENST00000629536 136 ntBASIC3.85□□□□□ -1.79
PDLIM1O00151 AC140479.6-201ENST00000633535 357 ntBASIC3.85□□□□□ -1.79
PDLIM1O00151 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PDLIM1O00151 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM1O00151 AC006504.1-201ENST00000562493 3666 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PDLIM1O00151 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PDLIM1O00151 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PDLIM1O00151 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PDLIM1O00151 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.84□□□□□ -1.79
PDLIM1O00151 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PDLIM1O00151 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PDLIM1O00151 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
PDLIM1O00151 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PDLIM1O00151 AC017079.2-201ENST00000416102 485 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 MTND2P15-201ENST00000418575 892 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 ELOCP6-201ENST00000429066 328 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.84□□□□□ -1.79
PDLIM1O00151 AC092170.1-201ENST00000440211 356 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.84□□□□□ -1.79
PDLIM1O00151 AL500522.2-201ENST00000448562 343 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 AL096803.2-201ENST00000450032 677 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 AC006539.3-201ENST00000454258 129 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 RPL7P32-201ENST00000457119 744 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 ELOCP12-201ENST00000458706 328 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 RPL6P9-201ENST00000466502 859 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 SNRPGP3-201ENST00000469405 227 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 RN7SL303P-201ENST00000469773 251 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 AC015908.1-201ENST00000478739 476 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 FTH1P24-201ENST00000503502 462 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.84□□□□□ -1.79
PDLIM1O00151 AC092593.2-201ENST00000513866 913 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 HMGN1P15-201ENST00000513870 295 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.84□□□□□ -1.79
PDLIM1O00151 RN7SKP283-201ENST00000517197 270 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.84□□□□□ -1.79
PDLIM1O00151 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
PDLIM1O00151 AC008011.1-201ENST00000545989 227 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms