Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC135178.6-201ENST00000605314 398 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC010857.1-201ENST00000606398 594 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC024933.1-201ENST00000608472 348 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC005344.1-201ENST00000613391 459 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 uc_338.32-201ENST00000615087 172 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC009318.3-201ENST00000616916 503 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC097372.4-201ENST00000625025 466 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 RNU6-792P-201ENST00000363490 107 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 RNA5SP515-201ENST00000364570 118 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 RNU6-31P-201ENST00000384388 108 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 RNU6-244P-201ENST00000391028 104 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 RPL17P36-201ENST00000420302 549 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AC245054.1-201ENST00000420944 258 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 OR4F13P-201ENST00000428478 931 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 MTCO3P21-201ENST00000430791 643 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AC114755.5-201ENST00000447760 831 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 RNU6-1218P-201ENST00000458990 108 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 RPL5P13-201ENST00000462840 709 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 FTH1P2-201ENST00000466086 412 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AC092902.1-201ENST00000486999 259 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AC010627.1-201ENST00000503819 1294 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AC021146.7-201ENST00000509604 775 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AC108157.1-201ENST00000510511 539 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AP000926.4-201ENST00000527351 454 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AC093014.1-201ENST00000548926 724 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AC122134.1-202ENST00000569111 1201 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 MIR3160-1-201ENST00000577972 85 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 BMS1P7-201ENST00000602440 1052 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 AL133370.2-201ENST00000619934 439 ntBASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM49D1C9J1S8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AL021368.2-201ENST00000606125 5352 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 RIOK3P1-201ENST00000418778 1528 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AP004289.2-201ENST00000444413 1457 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 MFSD8-236ENST00000641509 4050 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AL590704.1-201ENST00000402856 794 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC010385.1-201ENST00000412374 256 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 MTND2P15-201ENST00000418575 892 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 RPS6P14-201ENST00000425165 719 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 NDUFA5P10-201ENST00000432147 357 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 OR4C10P-201ENST00000434991 931 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 RPL21P89-201ENST00000444021 467 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AL645939.1-201ENST00000453429 797 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC010401.1-201ENST00000463867 348 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 CABYRP1-201ENST00000465493 1045 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC104629.2-201ENST00000468627 598 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 S100A11P1-201ENST00000477525 312 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC010468.3-201ENST00000508225 458 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC034244.2-201ENST00000514668 858 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 HIGD1AP18-201ENST00000520730 278 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 CBX3P5-201ENST00000552017 521 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC079148.1-201ENST00000565944 819 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms