Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AC025588.4-201ENST00000615802 908 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AL445523.1-201ENST00000451184 1362 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 AC026951.1-201ENST00000559530 2459 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 NMD3P1-201ENST00000439704 1488 ntBASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.51□□□□□ -1.53
COL4A3BPQ9Y5P4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AC074029.4-201ENST00000624796 1859 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 RPL21P132-201ENST00000331267 462 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 RNU6-374P-201ENST00000364146 108 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 RNU6-730P-201ENST00000383954 104 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AL049697.2-201ENST00000403708 294 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 CTSL3P-202ENST00000412179 788 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 QRSL1P2-201ENST00000418582 964 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AC012065.2-201ENST00000421295 375 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 ZYG11AP1-201ENST00000430329 837 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AL049745.1-201ENST00000433953 286 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 RPL23AP33-201ENST00000442301 452 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 Z80107.2-201ENST00000445127 392 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AL590399.6-201ENST00000446396 307 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 VN1R32P-201ENST00000452234 905 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 OR7K1P-201ENST00000546439 926 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 LSM3P2-201ENST00000551246 273 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 BGLT3-201ENST00000564523 994 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AC009852.2-201ENST00000567898 485 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AL031320.1-201ENST00000604177 357 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AP001521.2-201ENST00000608772 546 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AC072039.2-201ENST00000608883 439 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 BNIP3P41-202ENST00000616656 861 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 U73479.1-201ENST00000618062 168 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AC073968.1-201ENST00000618594 637 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
COL4A3BPQ9Y5P4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 RPL23AP57-201ENST00000332361 466 ntBASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 RNA5SP87-201ENST00000384155 118 ntBASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 AL121972.1-201ENST00000402023 252 ntBASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 RPL23AP39-201ENST00000415533 405 ntBASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 AC069213.2-201ENST00000420238 366 ntBASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 CKS1BP5-201ENST00000434172 273 ntBASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 AC093414.1-201ENST00000434712 514 ntBASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 UBE2FP3-201ENST00000436366 524 ntBASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 MTCO3P16-201ENST00000454456 754 ntBASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 MEMO1P3-201ENST00000459811 302 ntBASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 OR5H5P-201ENST00000503164 928 ntBASIC5.49□□□□□ -1.53
COL4A3BPQ9Y5P4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms