Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC108064.1-201ENST00000513791 460 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC099522.1-202ENST00000514718 367 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC079171.1-201ENST00000568788 914 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 EIF1P6-201ENST00000600054 334 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 RPL21P136-201ENST00000605378 396 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC005972.3-201ENST00000606304 481 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 VN1R9P-201ENST00000614184 867 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC099669.2-201ENST00000616549 437 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC006213.5-201ENST00000619673 288 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF6Q9Y252 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF6Q9Y252 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF6Q9Y252 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF6Q9Y252 AL139811.1-201ENST00000424779 2299 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF6Q9Y252 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF6Q9Y252 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF6Q9Y252 RLIMP1-201ENST00000339626 1680 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 AC016716.1-201ENST00000265882 708 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF6Q9Y252 OR8G2P-201ENST00000412796 908 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 PGBD4P8-201ENST00000412993 562 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 MTCO2P1-201ENST00000424648 477 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 NPM1P34-201ENST00000428821 893 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 VN1R25P-201ENST00000443385 738 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF6Q9Y252 RPL23AP15-201ENST00000450202 459 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 VN1R40P-201ENST00000455196 941 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 RPL23AP81-201ENST00000455252 467 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 RN7SL542P-201ENST00000467147 294 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 AC104689.1-201ENST00000473356 768 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 RPS29P19-201ENST00000479709 171 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 AP002812.1-201ENST00000495378 474 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 PRELID3BP7-201ENST00000503606 469 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 RN7SKP96-201ENST00000516948 297 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 RNU1-45P-201ENST00000517191 141 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 CCDC58P3-201ENST00000590792 430 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 AC104662.1-201ENST00000604448 511 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 AP000255.1-201ENST00000610276 676 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 AC006133.1-201ENST00000617106 264 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 AC018926.3-201ENST00000618841 406 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF6Q9Y252 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF6Q9Y252 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF6Q9Y252 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF6Q9Y252 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF6Q9Y252 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF6Q9Y252 NCAPGP1-201ENST00000505112 1814 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 MAPK10-373ENST00000641983 6772 ntBASIC3.79□□□□□ -1.8
RNF6Q9Y252 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF6Q9Y252 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RNF6Q9Y252 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RNF6Q9Y252 SNORA62.3-201ENST00000365110 153 ntBASIC3.78□□□□□ -1.8
RNF6Q9Y252 U3.15-201ENST00000365398 212 ntBASIC3.78□□□□□ -1.8
RNF6Q9Y252 RNU6-609P-201ENST00000365459 107 ntBASIC3.78□□□□□ -1.8
RNF6Q9Y252 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.78□□□□□ -1.8
RNF6Q9Y252 RNU6-1293P-201ENST00000384077 107 ntBASIC3.78□□□□□ -1.8
RNF6Q9Y252 MIR124-3-201ENST00000384866 87 ntBASIC3.78□□□□□ -1.8
RNF6Q9Y252 ATP5F1P3-201ENST00000397213 657 ntBASIC3.78□□□□□ -1.8
RNF6Q9Y252 PRRC2CP1-201ENST00000404428 159 ntBASIC3.78□□□□□ -1.8
RNF6Q9Y252 AL138878.1-201ENST00000405131 347 ntBASIC3.78□□□□□ -1.8
RNF6Q9Y252 SNORA11C-201ENST00000408532 129 ntBASIC3.78□□□□□ -1.8
RNF6Q9Y252 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.78□□□□□ -1.8
RNF6Q9Y252 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.78□□□□□ -1.8
RNF6Q9Y252 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.78□□□□□ -1.8
RNF6Q9Y252 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.78□□□□□ -1.8
RNF6Q9Y252 ATP5HP2-201ENST00000433885 485 ntBASIC3.78□□□□□ -1.8
RNF6Q9Y252 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.78□□□□□ -1.8
RNF6Q9Y252 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.78□□□□□ -1.8
RNF6Q9Y252 RPL37P6-202ENST00000464216 403 ntBASIC3.78□□□□□ -1.8
RNF6Q9Y252 AC034236.1-201ENST00000469891 373 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms