Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AL590609.2-201ENST00000421430 368 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 RPS26P47-201ENST00000427219 348 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 RN7SL517P-201ENST00000462240 305 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC010307.1-201ENST00000467206 836 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 SETP11-201ENST00000473027 690 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC103987.1-201ENST00000473394 348 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 COX6B1P5-201ENST00000509843 249 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC009643.1-201ENST00000532030 391 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC024909.2-201ENST00000553035 286 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 NMNAT1P1-201ENST00000554095 876 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 TRAV15-201ENST00000556680 249 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AL031985.2-201ENST00000600955 480 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC123786.2-201ENST00000603459 275 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AL590229.1-201ENST00000603497 542 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AL451086.1-201ENST00000605596 223 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC092653.1-201ENST00000608509 531 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 MIR8069-1-201ENST00000616627 86 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AL136981.2-201ENST00000617319 734 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC069209.1-201ENST00000619282 651 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 MIR8069-2-201ENST00000621412 86 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC019206.1-201ENST00000621938 425 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 Z69908.1-201ENST00000622603 247 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC116563.2-201ENST00000624751 535 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 TLK1P1-201ENST00000456760 2440 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AC090971.4-201ENST00000560291 1800 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 RNU6-500P-201ENST00000362349 107 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 RNU1-94P-201ENST00000362627 173 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 Y_RNA.436-201ENST00000384097 102 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 SNORA66-201ENST00000384792 133 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 MIR298-201ENST00000401212 88 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 PIGPP2-201ENST00000411569 458 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 GSTM3P2-201ENST00000412746 530 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 BTF3L4P1-201ENST00000413813 468 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 RPL18P10-201ENST00000425606 538 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 ELOCP10-201ENST00000440624 327 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AC004865.1-201ENST00000442276 1003 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 MTCO2P7-201ENST00000446518 666 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 KNOP1P3-201ENST00000446933 426 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 TCEA1P1-201ENST00000449716 880 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AC009961.3-201ENST00000449832 765 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 OR52J1P-201ENST00000450596 932 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 IGHV5-78-201ENST00000450948 295 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 NF1P3-201ENST00000457709 450 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 CYCSP34-201ENST00000458172 304 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 RPL7AP28-201ENST00000464513 571 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 MTND1P16-201ENST00000465177 898 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 492.6 ms