Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AC096861.1-201ENST00000616652 240 ntBASIC5.82□□□□□ -1.48
VTI1BQ9UEU0 AL159972.1-201ENST00000625150 448 ntBASIC5.82□□□□□ -1.48
VTI1BQ9UEU0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.82□□□□□ -1.48
VTI1BQ9UEU0 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTI1BQ9UEU0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.82□□□□□ -1.48
VTI1BQ9UEU0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTI1BQ9UEU0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTI1BQ9UEU0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.82□□□□□ -1.48
VTI1BQ9UEU0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTI1BQ9UEU0 AL354685.2-201ENST00000448218 1447 ntBASIC5.82□□□□□ -1.48
VTI1BQ9UEU0 AL353796.1-201ENST00000561542 3241 ntBASIC5.82□□□□□ -1.48
VTI1BQ9UEU0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTI1BQ9UEU0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTI1BQ9UEU0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC011155.1-201ENST00000316512 456 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 RNU6-1120P-201ENST00000362988 108 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 RNA5SP211-201ENST00000365516 117 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 MIR1275-201ENST00000408770 80 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 RNA5SP156-201ENST00000410250 110 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 RPL12P12-201ENST00000424633 501 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 USP9YP9-201ENST00000429406 715 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC138761.5-201ENST00000433967 325 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 GPR143P-201ENST00000434155 205 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC099670.2-201ENST00000435130 321 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC096775.1-201ENST00000437724 448 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AL450996.1-201ENST00000445574 1202 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 Z95327.1-201ENST00000446082 482 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 OR7E116P-201ENST00000448529 957 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 RAD23BP3-201ENST00000454157 1152 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 RPL12P39-201ENST00000455456 496 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 RN7SL168P-201ENST00000463821 279 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AL139099.1-201ENST00000497398 403 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AK3P4-201ENST00000504283 583 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC005798.1-201ENST00000513715 387 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 RNU6-1220P-201ENST00000517126 108 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC090572.1-201ENST00000519251 160 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AF235103.2-201ENST00000525753 346 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AL109766.1-201ENST00000555080 552 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AL009028.1-201ENST00000604895 802 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC015982.1-201ENST00000608113 465 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AL136295.6-201ENST00000610486 658 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 uc_338.26-201ENST00000612659 160 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 MIR7109-201ENST00000613748 65 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 uc_338.12-201ENST00000616344 181 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC022400.9-201ENST00000623633 273 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC073488.6-201ENST00000632293 754 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 NMD3P1-201ENST00000439704 1488 ntBASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VTI1BQ9UEU0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AL359893.1-201ENST00000447628 1580 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms