Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 MIR575-201ENST00000385013 94 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 PHBP1-201ENST00000392260 808 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AL160275.3-201ENST00000423876 471 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AC099344.1-201ENST00000433548 492 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 TDGF1P6-201ENST00000463873 448 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 RN7SL36P-201ENST00000469345 276 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 RPL23AP2-201ENST00000471227 466 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 RN7SL505P-201ENST00000482644 293 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AC012158.1-204ENST00000483430 465 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AC079768.1-201ENST00000503181 711 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AC005741.1-201ENST00000511094 432 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AC079600.1-201ENST00000550326 297 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 RN7SL178P-201ENST00000582930 304 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AC063977.7-201ENST00000594454 337 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 ATP1B3P1-201ENST00000605365 821 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AL359757.2-201ENST00000624309 274 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AC073488.8-201ENST00000631952 757 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 ZNF519P1-201ENST00000449011 1626 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 MTCO1P12-201ENST00000414273 1543 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 AP001273.1-201ENST00000624493 3152 ntBASIC8.28□□□□□ -1.08
RTN4Q9NQC3 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
RTN4Q9NQC3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC8.27□□□□□ -1.08
RTN4Q9NQC3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 SNORA55-201ENST00000364587 135 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 RNA5SP455-201ENST00000365190 119 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 NRBF2P3-201ENST00000432731 865 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 DNAJC19P5-201ENST00000443295 316 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 REG1CP-206ENST00000447469 496 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AP1B1P1-202ENST00000448124 191 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 RN7SL180P-201ENST00000466769 294 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 RN7SL58P-201ENST00000473445 294 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 APOOP3-201ENST00000536787 586 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AC009997.1-201ENST00000557862 129 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AC009120.3-201ENST00000563335 499 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AC020910.3-201ENST00000603701 874 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 SNRPGP17-201ENST00000603780 214 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AC009597.2-201ENST00000604659 592 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AC124303.1-201ENST00000605703 360 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AC245028.3-201ENST00000618197 285 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 MIR6754-201ENST00000621121 66 ntBASIC8.27□□□□□ -1.09
RTN4Q9NQC3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC8.27□□□□□ -1.09
RTN4Q9NQC3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms