Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC098824.1-201ENST00000453565 980 ntBASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 Z82190.1-201ENST00000454534 490 ntBASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC092754.1-201ENST00000472975 479 ntBASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC034222.1-201ENST00000494052 532 ntBASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC110775.1-201ENST00000513721 462 ntBASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC105233.3-201ENST00000531125 744 ntBASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AL049779.2-201ENST00000553847 315 ntBASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC006960.3-201ENST00000561845 705 ntBASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 RN7SL802P-201ENST00000577858 299 ntBASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC053481.3-201ENST00000577881 843 ntBASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 IMMP1LP3-201ENST00000604197 224 ntBASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AC091965.4-201ENST00000607691 587 ntBASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AL445264.1-201ENST00000621719 171 ntBASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM39Q9HCM9 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 ERCC6-202ENST00000374127 1782 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC007938.2-201ENST00000604666 2634 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 OR55B1P-203ENST00000641518 2602 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AP002001.2-201ENST00000529025 1469 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 Y_RNA.608-201ENST00000410647 95 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC022028.1-201ENST00000412054 408 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 MTND1P23-201ENST00000416931 372 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 SLC35E1P1-201ENST00000419313 864 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC007742.1-201ENST00000425789 329 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 BX890604.2-201ENST00000427883 474 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 CEACAMP1-201ENST00000434624 1035 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 NDUFB4P8-201ENST00000435351 367 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 ELOCP26-201ENST00000436067 329 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 DNAJC19P4-201ENST00000440115 345 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC104073.1-201ENST00000451988 151 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 RN7SL197P-201ENST00000466981 299 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 RPS26P39-201ENST00000469206 341 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AP001025.2-201ENST00000490908 477 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 PGAM1P13-201ENST00000507497 754 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 SCARNA21.2-201ENST00000516600 166 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 SNORA18.6-201ENST00000516792 115 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC090022.1-201ENST00000546569 311 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 MIR4716-201ENST00000579628 84 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC009977.1-201ENST00000586015 570 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 VN1R79P-201ENST00000593540 513 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC006272.2-201ENST00000594725 163 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC119501.1-201ENST00000603646 475 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 BCRP9-201ENST00000605312 388 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC138649.3-201ENST00000622154 254 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 AC000123.2-201ENST00000623124 461 ntBASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM39Q9HCM9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms