Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AP000756.2-201ENST00000624168 2567 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 PHKBP1-201ENST00000450951 1951 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC108751.5-201ENST00000492880 1336 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 Y_RNA.51-201ENST00000362725 102 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AL161909.1-201ENST00000397390 712 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 RN7SKP247-201ENST00000411094 308 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 GSTM3P2-201ENST00000412746 530 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 RPP40P1-201ENST00000426762 456 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC091390.1-201ENST00000433904 331 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AL031663.1-201ENST00000437445 219 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 MTCO2P7-201ENST00000446518 666 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 snoU13.1-201ENST00000459157 104 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 RN7SL354P-201ENST00000469282 294 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 RPL30P6-201ENST00000475925 342 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC025164.1-201ENST00000496249 478 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC008494.2-201ENST00000514544 370 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 HNRNPKP5-201ENST00000515300 253 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 RNA5SP135-201ENST00000517019 125 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 RN7SKP283-201ENST00000517197 270 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC008562.1-201ENST00000521763 330 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AP001880.2-201ENST00000538233 448 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 MIR3915-201ENST00000578518 97 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 OR4K7P-201ENST00000580232 945 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC103881.1-201ENST00000603476 538 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC009220.3-201ENST00000604318 586 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC116447.1-201ENST00000613153 453 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC091931.1-201ENST00000623488 728 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 AC005539.1-201ENST00000443768 1479 ntBASIC4.79□□□□□ -1.64
USP29Q9HBJ7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
USP29Q9HBJ7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC009229.4-201ENST00000623854 1947 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 Z99496.1-201ENST00000469424 1477 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 Y_RNA.77-201ENST00000362962 107 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 RNA5SP28-201ENST00000363841 119 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 OR52E6-202ENST00000379946 954 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 MIR195-201ENST00000385194 87 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AL591848.1-201ENST00000413092 322 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AL589823.1-201ENST00000429577 183 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC016712.1-201ENST00000431088 378 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC005154.2-201ENST00000438110 379 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AL591503.2-201ENST00000442314 1005 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 TPMTP4-201ENST00000450749 678 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC005008.1-201ENST00000456151 612 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC090142.1-201ENST00000465776 462 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC080014.1-201ENST00000496877 1201 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC005178.1-201ENST00000508392 440 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms