Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 Y_RNA.1-201ENST00000352915 104 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 RNA5SP46-201ENST00000362370 120 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 RNU6-1151P-201ENST00000384684 107 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 RPL31P1-201ENST00000398116 372 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 HMGB3P20-201ENST00000417997 600 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 USP9YP20-201ENST00000419224 558 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 HMGB3P24-201ENST00000433260 622 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 SKP1P1-201ENST00000438081 489 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC073909.1-201ENST00000447112 999 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC079448.1-201ENST00000449377 373 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 MTCO3P20-201ENST00000454926 688 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 MEMO1P3-201ENST00000459811 302 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 RPS23P6-201ENST00000466136 431 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 RPL23AP71-201ENST00000470966 469 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 RPL32P33-201ENST00000487023 394 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 RPS24P16-201ENST00000497294 392 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC025674.1-201ENST00000507074 324 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC010493.1-201ENST00000513479 292 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 RNU6-1153P-201ENST00000516760 105 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 SCARNA6.1-201ENST00000516989 238 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 FTH1P11-201ENST00000517577 551 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AL512360.1-201ENST00000555346 234 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC040958.1-201ENST00000561102 201 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC018695.5-201ENST00000605872 315 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC009233.1-201ENST00000616477 371 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 RN7SL544P-201ENST00000617232 284 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 RN7SL763P-201ENST00000620922 284 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 MIR6719-201ENST00000622428 87 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC110994.2-201ENST00000635481 492 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 MIR3662-201ENST00000637030 95 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 HSPA8P14-201ENST00000552265 1805 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 AC104964.3-201ENST00000606115 2860 ntBASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXP3Q9BZS1 HSPA8P17-201ENST00000427029 1382 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AL078621.3-201ENST00000623707 2042 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AC008079.2-201ENST00000623543 20396 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 OR9K1P-201ENST00000326513 941 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 SNORA64.1-201ENST00000362600 132 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 RNU4-73P-201ENST00000363164 141 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 RNU6-1085P-201ENST00000363576 107 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 Y_RNA.409-201ENST00000383990 98 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms