Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RN7SKP82-201ENST00000516786 223 ntBASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 RNU6-1261P-201ENST00000517194 104 ntBASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 AC084757.1-201ENST00000559987 490 ntBASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 AC004987.4-201ENST00000603383 338 ntBASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 AL031281.1-201ENST00000604049 488 ntBASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 AL158042.1-201ENST00000605338 460 ntBASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 AC020634.1-201ENST00000608701 549 ntBASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 AL359535.1-201ENST00000612100 1087 ntBASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 SNX18P1Y-201ENST00000616231 511 ntBASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 MIR8059-201ENST00000620427 81 ntBASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 OR8B1P-202ENST00000641132 1178 ntBASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 AC104623.2-202ENST00000623477 4002 ntBASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 MTND5P31-201ENST00000419366 1374 ntBASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTFDC1Q9BY42 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 AC021242.1-201ENST00000507315 2035 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 MIR383-201ENST00000362257 73 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 SNORA11F-201ENST00000408237 128 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 AC092634.6-201ENST00000418558 192 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 MTND4P20-201ENST00000424125 869 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 RPP40P1-201ENST00000426762 456 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 RPL31P54-201ENST00000429803 370 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 UBE2V1P1-201ENST00000430836 445 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 CEACAMP1-201ENST00000434624 1035 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 Z95327.1-201ENST00000446082 482 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 AP000893.1-201ENST00000474462 794 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 RN7SL817P-201ENST00000480777 288 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 RPS3AP22-201ENST00000488297 769 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 BNIP3P24-201ENST00000593398 557 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 AC011978.2-201ENST00000569835 2054 ntBASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
RTFDC1Q9BY42 MFSD8-242ENST00000641690 4199 ntBASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 RNU6-251P-201ENST00000363235 104 ntBASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 UBBP2-201ENST00000376781 231 ntBASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 VDAC2P1-201ENST00000399358 958 ntBASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 AC004022.2-201ENST00000413824 193 ntBASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 MTCO3P11-201ENST00000455103 774 ntBASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 AP000942.1-201ENST00000463969 747 ntBASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 RN7SL604P-201ENST00000492589 296 ntBASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 RN7SL691P-201ENST00000494487 301 ntBASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 SNORA48.10-201ENST00000516965 160 ntBASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 DUXAP6-201ENST00000553858 601 ntBASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 MIR4429-201ENST00000580105 73 ntBASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 AC005412.1-201ENST00000580812 1049 ntBASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 AC233702.9-201ENST00000581528 203 ntBASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.48□□□□□ -1.53
RTFDC1Q9BY42 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms