Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SNORD108-201ENST00000459332 71 ntBASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 RPL7P15-201ENST00000461190 712 ntBASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 AC004069.2-201ENST00000505438 1114 ntBASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 MTATP6P22-201ENST00000507369 598 ntBASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 RN7SKP209-201ENST00000516888 304 ntBASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 RNU6-889P-201ENST00000517189 103 ntBASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 TRMT10BP1-201ENST00000519377 943 ntBASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 GTF2IP22-201ENST00000554443 182 ntBASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 MIR3158-1-201ENST00000583596 81 ntBASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 AC242628.1-201ENST00000606810 391 ntBASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 AC091905.1-201ENST00000624400 311 ntBASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 AP000553.6-201ENST00000641242 118 ntBASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ECHDC3Q96DC8 AL353746.1-201ENST00000566293 6881 ntBASIC3.71□□□□□ -1.81
ECHDC3Q96DC8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 RNU1-87P-201ENST00000363727 170 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 SNORA73.2-201ENST00000364946 201 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 SNORA5A-201ENST00000384111 134 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 SNORD3H-201ENST00000384486 214 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 ATP5A1P2-201ENST00000412323 255 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 RPL7P4-203ENST00000430239 730 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 AC107398.1-201ENST00000486904 505 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 BTF3L4P4-201ENST00000506381 449 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 AC108157.1-201ENST00000510511 539 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 AC010342.1-201ENST00000514047 877 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 RANP9-201ENST00000519957 271 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 AL163642.2-201ENST00000604722 1019 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 HMGB1P50-201ENST00000605814 607 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 AC006133.1-201ENST00000617106 264 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 AC027287.1-201ENST00000553115 1453 ntBASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.71□□□□□ -1.82
ECHDC3Q96DC8 AL122126.1-201ENST00000546905 1318 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 MAPK10-373ENST00000641983 6772 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 RNU4-31P-201ENST00000384211 141 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 PTMAP2-201ENST00000397627 327 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 AL035423.1-201ENST00000420331 213 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 USP9YP7-201ENST00000436723 430 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 AL645931.1-201ENST00000439737 410 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 RPL34P26-201ENST00000445636 354 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 USP9YP32-201ENST00000452432 430 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 RPL9P32-201ENST00000464118 620 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 RPL30P11-201ENST00000495304 339 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 AP002812.1-201ENST00000495378 474 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 HMGB1P21-201ENST00000502313 581 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 NDUFB4P9-201ENST00000511646 388 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 RNU6-760P-201ENST00000516078 97 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 Vault.1-201ENST00000516474 102 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 AC022784.5-201ENST00000522241 437 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 OR4A2P-201ENST00000527276 913 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 AC092747.2-201ENST00000545069 983 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 AC020914.4-201ENST00000597690 277 ntBASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ECHDC3Q96DC8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms