Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 MTCYBP42-201ENST00000444653 1130 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 RPL35AP15-201ENST00000468042 339 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 AL132838.2-201ENST00000492041 314 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 HPRT1P2-201ENST00000505250 544 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 MTND4LP18-201ENST00000526864 291 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 CBX3P7-201ENST00000532876 502 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SYNE4Q8N205 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 AC011611.5-201ENST00000552477 578 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 SNORD39.2-201ENST00000579995 76 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 AC022662.1-201ENST00000580252 331 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 AP002906.1-201ENST00000603405 233 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 AP001596.2-201ENST00000608410 312 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 VN1R7P-201ENST00000619242 903 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SYNE4Q8N205 AC020633.1-201ENST00000468439 2247 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SYNE4Q8N205 AC116158.1-201ENST00000560231 2129 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SYNE4Q8N205 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SYNE4Q8N205 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SYNE4Q8N205 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 RNU5A-2P-201ENST00000384337 116 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 SNORA40.2-201ENST00000390847 128 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 SNORD65C-201ENST00000390962 71 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SYNE4Q8N205 OR8G2P-201ENST00000412796 908 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 AL356095.1-201ENST00000417217 199 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 PTP4A1P1-201ENST00000420539 515 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 MTCO1P19-201ENST00000443487 500 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SYNE4Q8N205 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC107015.1-201ENST00000466902 747 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 SCARNA13-201ENST00000516672 275 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 AL359219.2-201ENST00000555184 348 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 DUXAP1-201ENST00000556632 463 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC006362.1-201ENST00000567392 174 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC011260.1-201ENST00000578420 472 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC017100.2-201ENST00000584628 355 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC008759.1-201ENST00000589783 983 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 VN1R82P-201ENST00000601481 356 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 AL161729.3-201ENST00000603533 673 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 AL031281.1-201ENST00000604049 488 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC018618.2-201ENST00000604770 446 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 AL160290.3-201ENST00000604869 165 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 AL513477.2-201ENST00000607858 568 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 AL359740.1-201ENST00000624340 592 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC005609.4-201ENST00000625071 447 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 AC140479.6-201ENST00000633535 357 ntBASIC5.47□□□□□ -1.53
SYNE4Q8N205 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SYNE4Q8N205 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SYNE4Q8N205 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SYNE4Q8N205 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SYNE4Q8N205 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.47□□□□□ -1.53
SYNE4Q8N205 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SYNE4Q8N205 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
SYNE4Q8N205 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE4Q8N205 DHX9P1-201ENST00000436565 3076 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE4Q8N205 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE4Q8N205 RNU1-87P-201ENST00000363727 170 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 RNU4-7P-201ENST00000364758 141 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE4Q8N205 RNU1-63P-201ENST00000383902 164 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 Y_RNA.560-201ENST00000384689 102 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 RNA5SP36-201ENST00000410197 133 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms