Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 AC005899.7-201ENST00000618199 588 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 GTF2H2B-203ENST00000508065 1432 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 AL161912.4-201ENST00000623889 2468 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 DBF4P1-201ENST00000412976 1892 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 AL133243.4-201ENST00000623116 3109 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 SNX18P3-202ENST00000565670 1750 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 AC008957.3-201ENST00000624112 2242 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 RNU5E-8P-201ENST00000363502 116 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 RPL23AP32-201ENST00000395315 459 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 CHEK2P3-201ENST00000416118 248 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 COX6CP17-201ENST00000421389 185 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 RN7SKP295-201ENST00000517264 153 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 AC012616.1-201ENST00000600294 197 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 AC004696.1-201ENST00000614345 607 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 uc_338.15-201ENST00000615470 191 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 AC090607.5-201ENST00000615692 224 ntBASIC7.26□□□□□ -1.25
RC3H1Q5TC82 NAA50-211ENST00000630058 177 ntTSL 5 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.26□□□□□ -1.25
RC3H1Q5TC82 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.25□□□□□ -1.25
RC3H1Q5TC82 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 RNU4-20P-201ENST00000365601 151 ntBASIC7.25□□□□□ -1.25
RC3H1Q5TC82 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 SNORD116-23-201ENST00000384645 92 ntBASIC7.25□□□□□ -1.25
RC3H1Q5TC82 CD3D-202ENST00000392884 476 ntTSL 2 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AL034403.1-201ENST00000399414 885 ntBASIC7.25□□□□□ -1.25
RC3H1Q5TC82 RPS20P2-201ENST00000402520 389 ntBASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 CYCSP6-201ENST00000434498 302 ntBASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AL731534.1-201ENST00000434711 269 ntBASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 TTC39CP1-201ENST00000512513 755 ntBASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 HMGB1P6-201ENST00000569046 646 ntBASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AC104785.1-201ENST00000603220 588 ntBASIC7.25□□□□□ -1.25
RC3H1Q5TC82 AC000068.2-201ENST00000608816 460 ntBASIC7.25□□□□□ -1.25
RC3H1Q5TC82 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.25□□□□□ -1.25
RC3H1Q5TC82 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms