Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
VARS2Q5ST30 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
VARS2Q5ST30 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
VARS2Q5ST30 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.32□□□□□ -1.24
VARS2Q5ST30 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.32□□□□□ -1.24
VARS2Q5ST30 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
VARS2Q5ST30 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
VARS2Q5ST30 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
VARS2Q5ST30 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
VARS2Q5ST30 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.32□□□□□ -1.24
VARS2Q5ST30 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.32□□□□□ -1.24
VARS2Q5ST30 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
VARS2Q5ST30 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
VARS2Q5ST30 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.32□□□□□ -1.24
VARS2Q5ST30 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VARS2Q5ST30 BX322650.1-201ENST00000332359 2143 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC7.31□□□□□ -1.24
VARS2Q5ST30 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
VARS2Q5ST30 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VARS2Q5ST30 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
VARS2Q5ST30 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
VARS2Q5ST30 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.31□□□□□ -1.24
VARS2Q5ST30 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
VARS2Q5ST30 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.31□□□□□ -1.24
VARS2Q5ST30 RNA5SP308-201ENST00000362532 115 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 RNU6-511P-201ENST00000363496 107 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 RNU1-65P-201ENST00000363919 148 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 SNORA62.2-201ENST00000364672 152 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 RNU6-1130P-201ENST00000365434 107 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 SNORD116-18-201ENST00000383961 92 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 Y_RNA.541-201ENST00000384640 113 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
VARS2Q5ST30 RNU6-918P-201ENST00000391219 106 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 AC017079.2-201ENST00000416102 485 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.31□□□□□ -1.24
VARS2Q5ST30 RPL36AP6-201ENST00000435770 321 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 AL034399.1-201ENST00000451535 380 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 RPL23AP12-201ENST00000467573 473 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 AC069499.1-201ENST00000489433 509 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.31□□□□□ -1.24
VARS2Q5ST30 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.31□□□□□ -1.24
VARS2Q5ST30 RNU2-10P-201ENST00000516375 211 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.31□□□□□ -1.24
VARS2Q5ST30 AC009852.2-201ENST00000567898 485 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 AC106782.4-201ENST00000568264 210 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 LARP7P2-201ENST00000575306 125 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 MIR4300-201ENST00000581016 96 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 SS18L2P2-201ENST00000583960 235 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.31□□□□□ -1.24
VARS2Q5ST30 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 AP000843.1-201ENST00000624880 701 ntBASIC7.31□□□□□ -1.24
VARS2Q5ST30 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VARS2Q5ST30 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
VARS2Q5ST30 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VARS2Q5ST30 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VARS2Q5ST30 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VARS2Q5ST30 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
VARS2Q5ST30 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
VARS2Q5ST30 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
VARS2Q5ST30 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VARS2Q5ST30 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AP000432.2-201ENST00000624164 2048 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AC009643.2-201ENST00000603543 1448 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARS2Q5ST30 SNORA63.4-201ENST00000362763 126 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 Y_RNA.127-201ENST00000363386 109 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 Y_RNA.399-201ENST00000383955 105 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 MIR628-201ENST00000385229 95 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 RNA5SP105-201ENST00000391123 113 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 AL133260.1-201ENST00000405720 405 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 NMD3P2-201ENST00000421815 761 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 PSMA2P3-201ENST00000429685 675 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AL590128.1-201ENST00000433407 286 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 AL645568.3-201ENST00000433683 316 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.3□□□□□ -1.24
VARS2Q5ST30 AL513124.1-201ENST00000450410 614 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 HMGB1P4-201ENST00000455362 567 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 RPL21P8-201ENST00000465083 535 ntBASIC7.3□□□□□ -1.24
VARS2Q5ST30 AC093267.1-201ENST00000489176 961 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms