Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU6-1129P-201ENST00000515964 104 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 BRD9P1-201ENST00000529855 560 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.78□□□□□ -1.8
CX3CL1P78423 FKBP1BP1-201ENST00000553366 325 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.78□□□□□ -1.8
CX3CL1P78423 MIR3667-201ENST00000581025 74 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.78□□□□□ -1.8
CX3CL1P78423 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.78□□□□□ -1.8
CX3CL1P78423 AC103881.1-201ENST00000603476 538 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 YWHAQP7-201ENST00000603536 658 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 AL031320.1-201ENST00000604177 357 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 AL592221.1-201ENST00000605266 382 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 AP003117.2-201ENST00000606010 545 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.78□□□□□ -1.8
CX3CL1P78423 LINC00901.1-201ENST00000617252 152 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.78□□□□□ -1.8
CX3CL1P78423 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CX3CL1P78423 AL672167.1-203ENST00000641299 2975 ntBASIC3.78□□□□□ -1.81
CX3CL1P78423 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
CX3CL1P78423 EOGT-210ENST00000615922 1931 ntBASIC3.78□□□□□ -1.81
CX3CL1P78423 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
CX3CL1P78423 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CL1P78423 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CX3CL1P78423 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CL1P78423 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CL1P78423 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CL1P78423 AL445487.1-201ENST00000415694 1580 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CL1P78423 AC017104.4-201ENST00000636283 1592 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CL1P78423 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CX3CL1P78423 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CL1P78423 OR52B1P-201ENST00000316506 909 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CX3CL1P78423 RNU1-108P-201ENST00000362556 161 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 RNA5SP191-201ENST00000362585 102 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CL1P78423 RNA5SP113-201ENST00000410486 84 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.77□□□□□ -1.81
CX3CL1P78423 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.77□□□□□ -1.81
CX3CL1P78423 AC104837.2-201ENST00000427236 424 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 MTND5P25-201ENST00000430499 799 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 RPS6P15-201ENST00000431996 751 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 NRBF2P3-201ENST00000432731 865 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 KCTD10P1-201ENST00000434203 625 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CX3CL1P78423 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.77□□□□□ -1.81
CX3CL1P78423 RPL18AP17-201ENST00000455326 198 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.77□□□□□ -1.81
CX3CL1P78423 RN7SL610P-201ENST00000463845 291 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.77□□□□□ -1.81
CX3CL1P78423 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.77□□□□□ -1.81
CX3CL1P78423 RNF138P1-201ENST00000502765 546 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.77□□□□□ -1.81
CX3CL1P78423 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.77□□□□□ -1.81
CX3CL1P78423 AC091868.1-201ENST00000508746 304 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CX3CL1P78423 RN7SKP234-201ENST00000517173 224 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.77□□□□□ -1.81
CX3CL1P78423 AP000926.4-201ENST00000527351 454 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CL1P78423 AP001880.2-201ENST00000538233 448 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CX3CL1P78423 AC008127.2-201ENST00000549925 1075 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.77□□□□□ -1.81
CX3CL1P78423 AL512347.1-201ENST00000566420 503 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.77□□□□□ -1.81
CX3CL1P78423 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.77□□□□□ -1.81
CX3CL1P78423 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.77□□□□□ -1.81
CX3CL1P78423 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.77□□□□□ -1.81
CX3CL1P78423 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.77□□□□□ -1.81
CX3CL1P78423 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.77□□□□□ -1.81
CX3CL1P78423 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.77□□□□□ -1.81
CX3CL1P78423 AC245297.2-201ENST00000610119 565 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 AC008083.4-201ENST00000615076 444 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.77□□□□□ -1.81
CX3CL1P78423 AC092650.2-201ENST00000619984 902 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 AP006248.2-201ENST00000623309 592 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.77□□□□□ -1.81
CX3CL1P78423 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CX3CL1P78423 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.77□□□□□ -1.81
CX3CL1P78423 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.77□□□□□ -1.81
CX3CL1P78423 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.77□□□□□ -1.81
CX3CL1P78423 AL442639.1-201ENST00000625030 1899 ntBASIC3.77□□□□□ -1.81
CX3CL1P78423 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CX3CL1P78423 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CX3CL1P78423 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CL1P78423 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CL1P78423 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.76□□□□□ -1.81
CX3CL1P78423 SGO1P2-201ENST00000429458 1589 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CL1P78423 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CL1P78423 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CL1P78423 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CL1P78423 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.76□□□□□ -1.81
CX3CL1P78423 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CX3CL1P78423 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.76□□□□□ -1.81
CX3CL1P78423 SDAD1P1-202ENST00000524156 2051 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms